Wiki · Index

Gene Index

Every gene the corpus names, re-scanned across the 820 published pages of this edition. Each entry carries its mention count and links straight to the papers and concept pages that discuss it — search a symbol or alias, or filter by cluster.

514
Genes
28,450
Mentions
820
Pages scanned
18
Clusters
APOE Amyloid & Tau core 3,381 477 docs
Matched on apoe[234]? apo[- ]?E[234]? apolipoprotein E
  1. The Bond not Madepaper290
  2. The Return Legpaper153
  3. The Genetic Architecture of Neurodegenerationpaper109
  4. The Narrow Gatepaper101
  5. Ramsdenpaper87
  6. Mapping the Vascular Dimension Onto the Genetic Dimensionpaper80
  7. The Homeostatic–Matrix–Synaptic (HMS) Collapse Modelpaper77
  8. The Wrong Half of the Moleculepaper75
  9. The Vascular Phasingpaper65
  10. The Unthrown Switchpaper62
  11. The Architecture of Resistancepaper58
  12. How the Brain's Clearance System Becomes the Disease's Highwaypaper57
  13. The Crowded Cleftpaper57
  14. The Switch and the Sievepaper48
  15. The Vascular Dimensionpaper47
  16. The Viral Trajectorypaper45
  17. The First Emberpaper44
  18. The Licensing Tyrosinepaper37
  19. The Architect's Reprievepaper34
  20. The Architect's Understudypaper34
  21. The Uncleared Signalpaper34
  22. The Load-Bearing Lipidpaper32
  23. Why HMS Becomes HMS+Ppaper31
  24. The Losing Axonpaper30
  25. The Architect's Handshakepaper29
  26. The Brain's Own Antimicrobial Defensepaper29
  27. Reelin-ApoE receptor axis disruptionconcept22
  28. How to Fix the Broken Recycling Systempaper21
  29. The Corruption of the Gardenerpaper21
  30. The Fifth Surfacepaper21
  31. The Load-Bearing Neuronpaper21
  32. Gouraspaper20
  33. Margolispaper20
  34. ApoE4 structural vulnerabilityconcept18
  35. Peroxidized ApoE as proximate causeconcept18
  36. The Fifty-year Prescriptionpaper18
  37. The Gardener's Restraintpaper17
  38. The Honest Cascadepaper17
  39. Immune-pathogen interaction modelconcept16
  40. Lipid peroxidation cascade at synapseconcept16
  41. Multi-cellular pathologyconcept16
  42. Neurovascular dysfunction as initiating eventconcept16
  43. Post-translational modification dysregulationconcept16
  44. The Unified Architecture of Collapsepaper15
  45. The Unrepaired Breachpaper15
  46. PARP Inhibitors and the Locus Coeruleuspaper14
  47. APOE4 Pathogen Interactionconcept12
  48. Moosmann & Sohrepaper12
  49. TOMM40 Import Gateconcept12
  50. APOE4 Hubnode11
  51. The synapse that could not switch offpaper11
  52. Lipid Transportconcept10
  53. Iron Chelation and GPX4 Stabilizationpaper10
  54. Plaques Are Tombstones, Not Killerspaper10
  55. Rappoportpaper10
  56. The Same Machinepaper10
  57. Chronic Excitatory Insufficiencyconcept9
  58. Is the ER–Mitochondria Contact Site the Real Driver?paper9
  59. Testing a Popular Treatment Protocolpaper9
  60. The Janus Lipidpaper9
  61. The Locus Coeruleus & the Noradrenergic Prodromepaper9
  62. Cholesterol Homeostasisconcept8
  63. Dietary Fatty Acid APOE4 Rescueconcept8
  64. Endolysosomal Dysfunctionconcept8
  65. From Synapse Loss to Neuronal Death in Alzheimer's Diseasepaper8
  66. Gene Environment Interactionconcept8
  67. Homeostatic Microglial Collapsepaper8
  68. Lipid Metabolismconcept8
  69. The Microglial Thesis (Downloadable PDF)paper8
  70. The Scheduled Withdrawalpaper8
  71. ApoE-centric unified modelconcept7
  72. APOE4 Endolysosomal Dysfunctionconcept7
  73. Endosomal Traffickingconcept7
  74. Lipid Peroxidationconcept7
  75. Low Signal, High Noisepaper7
  76. The Silenced Eraserpaper7
  77. Alzheimer's disease — a process in timepaper6
  78. Brain Lipid Homeostasis Restorationconcept6
  79. Cholesterol Transportconcept6
  80. Chronic intracellular infection modelconcept6
  81. Dual Pathogen AD Pathogenesisconcept6
  82. Epigenetic Repressionconcept6
  83. Infectious etiology of late-onset ADconcept6
  84. Matrix Sulfation Nodeconcept6
  85. Membrane Biologyconcept6
  86. Olfactory Route Neuroinvasionconcept6
  87. Olfactory vector hypothesisconcept6
  88. Selective Tau Disruptionconcept6
  89. Smallpaper6
  90. Strictly at the Borderpaper6
  91. Tau Scaffolding Interactionsconcept6
  92. The Acid Testpaper6
  93. The Architect's Scaffoldpaper6
  94. The Coerulean Pincerpaper6
  95. The Master Theorypaper6
  96. The Two Anchorspaper6
  97. Vesicular Traffickingconcept6
  98. Antibody Target Specificityconcept5
  99. ApoE isoform-heparin binding differencesconcept5
  100. Cholesterol deficiency driving AD pathologyconcept5
  101. Disciplinary Silos in Alzheimer's Disease Research, 1950–2020paper5
  102. Plaque IgG Sequestrationconcept5
  103. Systemic to Central Immune Signalingconcept5
  104. The Coerulean Shearspaper5
  105. The Indifferent Neuronpaper5
  106. The Mitochondrion as Nexuspaper5
  107. The Speck and the Architectpaper5
  108. The Temporal Architecture of Collapsepaper5
  109. The Therapeutic Landscape of Collapsepaper5
  110. Trauma Induced Viral Reactivationconcept5
  111. Vessel Associated Microglial Activationconcept5
  112. Viral Pathogenesisconcept5
  113. Abeta aggregation as necessary initiating eventconcept4
  114. Autophagy Dysfunctionconcept4
  115. Compensatory Homeostasisconcept4
  116. Endosomal Nexusnode4
  117. Environmental Toxicologyconcept4
  118. Excitatory Neurotransmissionconcept4
  119. Genetic evidence as gold standard for causalityconcept4
  120. Innate Immunityconcept4
  121. Long preclinical phase of AD pathologyconcept4
  122. Multifactorial modulation of disease trajectoryconcept4
  123. PERK DLX1 Tau Axisconcept4
  124. Synaptic Physiologyconcept4
  125. Synaptic Plasticityconcept4
  126. The DAM Trajectory and the Matrix-degrading Armpaper4
  127. The Expected Eventpaper4
  128. The Muscle's Errandpaper4
  129. The Time to Retractpaper4
  130. Translational Regulation in Tauopathyconcept4
  131. AD as accumulation of insults exceeding homeostasisconcept3
  132. Age-dependent feedback loops in neurodegenerationconcept3
  133. AI Neurotherapeutic Discoveryconcept3
  134. Amyloid Nucleationconcept3
  135. Antioxidant defense failureconcept3
  136. Autophagy-lysosomal failureconcept3
  137. BIN1 Autophagic Regulationconcept3
  138. Blood-based biomarker discoveryconcept3
  139. Chronobiologic neuroprotection via melatoninconcept3
  140. Cognitive resilience as dynamic protective conceptconcept3
  141. Dietary Sodium Neurodegenerationconcept3
  142. Entropy as organizing principleconcept3
  143. Environmental and socioeconomic risk factorsconcept3
  144. Environmental toxicology of neurodegenerationconcept3
  145. Epigenetic regulation of AD genesconcept3
  146. ESCRT III Membrane Scissionconcept3
  147. Evolutionary framework for AD causationconcept3
  148. Evolutionary mismatch between genes and modern lifestyleconcept3
  149. Evolutionary mismatch hypothesisconcept3
  150. Extracellular Matrix Pathologyconcept3
  151. Familial vs sporadic ADconcept3
  152. Ferroptosis and the Phase II Oligodendrocyte Crisispaper3
  153. GAG-driven AD pathogenesisconcept3
  154. Glycobiologyconcept3
  155. Gut-brain axis in neuroinflammationconcept3
  156. Health disparities in ADconcept3
  157. Infectious etiology of LOADconcept3
  158. Innate immunity failure in sporadic ADconcept3
  159. Inside Out Plaqueconcept3
  160. Intracellular Amyloidconcept3
  161. Khachaturianpaper3
  162. Lipid-driven neurodegenerationconcept3
  163. Lipid-glycan crosstalk in ADconcept3
  164. Liver-brain metabolic axisconcept3
  165. Lysosomal Acidificationconcept3
  166. Lysosomal Storage Diseaseconcept3
  167. Membrane lipid pathology in ADconcept3
  168. Mercury as primary AD causeconcept3
  169. Metabolic dysfunction in neurodegenerationconcept3
  170. Metal-protein interaction in diseaseconcept3
  171. Microglial Protein Biomarkersconcept3
  172. Modifiability of AD riskconcept3
  173. Morphological analysis methodologyconcept3
  174. Mosaic model of aging brainconcept3
  175. Multi-pathway AD pathophysiology reviewconcept3
  176. Multifactorial causal networkconcept3
  177. Multifactorial prevention through modifiable risk factorsconcept3
  178. Neurotransmitter disruption cascadeconcept3
  179. Non-optimal aging rather than normal aging processconcept3
  180. Onset vs Progressionconcept3
  181. Oxidative stress as unifying mechanismconcept3
  182. Population-specific AD genetic signaturesconcept3
  183. Precision medicine for ADconcept3
  184. Production-clearance equilibriumconcept3
  185. Proteasome Tau Feedbackconcept3
  186. Proteoglycan role in amyloid formationconcept3
  187. Quality Control Collapseconcept3
  188. Risk factor convergenceconcept3
  189. SorLA Lipid ER Regulationconcept3
  190. The Case for the Cascadepaper3
  191. The Complement-pruning Substratepaper3
  192. The Geode and the Flowerpaper3
  193. The Locus Coeruleus Bridgepaper3
  194. The Matrix of Collapsepaper3
  195. The Proteolytic Turnpaper3
  196. The Tide-gatepaper3
  197. Transcriptional Pause Releaseconcept3
  198. Unified theory of AD etiologyconcept3
  199. Vascular Amyloid Interactionconcept3
  200. Vascular dysfunction as earliest detectable changeconcept3
  201. When the Brain's Immune Cells Turn Toxicpaper3
  202. Abeta as stress response markerconcept2
  203. Acyloxyacyl Hydrolase Neuroprotectionconcept2
  204. AD as accelerated aging of Abeta managementconcept2
  205. AD as clinical syndrome not diseaseconcept2
  206. AD caused by APP dysregulation not Abeta per seconcept2
  207. Adult Neurogenesisconcept2
  208. Age-dependent threshold modelconcept2
  209. Age-related immune dysfunction enables neurotropic virusesconcept2
  210. Aging accelerators and deceleratorsconcept2
  211. Aging as Mechanismconcept2
  212. Aging as root cause of ADconcept2
  213. Aging-epigenetic-genetic interactionconcept2
  214. AI Disease Model Discoveryconcept2
  215. AI-based early diagnosisconcept2
  216. Aluminum as primary environmental causeconcept2
  217. Aluminum driving amyloid productionconcept2
  218. Amyloid and tau as secondary byproductsconcept2
  219. Amyloid as antimicrobial defenseconcept2
  220. Amyloid as downstream secondaryconcept2
  221. Amyloid clearance as important as depositionconcept2
  222. Amyloid Clinical Disconnectconcept2
  223. Amyloid plaques as fibrotic scar tissue from BBB repairconcept2
  224. Amyloid-beta as innate immune defenseconcept2
  225. Anti Ferroptotic Botanicalsconcept2
  226. Antimicrobial Defenseconcept2
  227. Antimicrobial hypothesis of amyloidconcept2
  228. APP and tau pathology linked through transport disruptionconcept2
  229. APP as dependence receptorconcept2
  230. Astrocyte network management hypothesisconcept2
  231. Astrocyte-driven amyloid buildupconcept2
  232. Asymptomatic AD Phenotypingconcept2
  233. ATN biomarker classification systemconcept2
  234. ATP-chaperone-protein folding axisconcept2
  235. Autoimmune contribution via BBB compromiseconcept2
  236. Autoimmune Neurodegenerationconcept2
  237. Autophagic Collapseconcept2
  238. Autophagyconcept2
  239. Autophagy-amyloid couplingconcept2
  240. Axon initial segment as key disease locusconcept2
  241. Axonal atheroma hypothesisconcept2
  242. Axonal transport failure as unifying mechanismconcept2
  243. Bacterial exudate-driven neurodegenerationconcept2
  244. Barrier dysfunction pathologyconcept2
  245. BBB as gatekeeper failureconcept2
  246. BBB breakdown cascadeconcept2
  247. BBB degradation and pathogen invasionconcept2
  248. BBB-mediated vascular contributionconcept2
  249. BCG Immune Checkpoint Modulationconcept2
  250. Beta Alanine Neurotransmissionconcept2
  251. Bimodal brain (inference vs training)concept2
  252. Bioenergetic defects as early eventsconcept2
  253. Blood-based biomarker panels for preclinical detectionconcept2
  254. Blood-based lipid and protein module biomarkersconcept2
  255. Brain DNA blueprint is altered in AD neuronsconcept2
  256. Calcium-mediated tauopathyconcept2
  257. Cannabinoid Neuroprotectionconcept2
  258. Causal and Commonpaper2
  259. Causation pyramid modelconcept2
  260. CDK3 Cell Cycle Toxicityconcept2
  261. Cellular Identityconcept2
  262. Cellular Vectorsconcept2
  263. Cholinergic network failure in ADconcept2
  264. Chronic intracellular pathogen-driven neurodegenerationconcept2
  265. Chronic neuroinflammation from infectionconcept2
  266. Chronic neuroinflammation from peripheryconcept2
  267. Circadian Immune Regulationconcept2
  268. Circadian regulation of glial functionconcept2
  269. Clearance failure vs. overproductionconcept2
  270. Comparing Different Viral Triggerspaper2
  271. Computational AD Subtypingconcept2
  272. Convergent risk factor pathwaysconcept2
  273. Convergent signaling through Wnt-PCP-RhoA-ROCKconcept2
  274. Convergent Synaptic Collapseconcept2
  275. Convergent Synaptic Collapse (CSC) — Grading Referencepaper2
  276. Cumulative axonal defect accumulationconcept2
  277. Cytoskeletal disorder as core pathologyconcept2
  278. Cytoskeletal Dynamicsconcept2
  279. Dark Genome Variationconcept2
  280. Double-hit mutation hypothesisconcept2
  281. Dynamic and region-independent disease mechanismsconcept2
  282. Eight factors of dementia frameworkconcept2
  283. Endosomal Lysosomal Networkconcept2
  284. Energy metabolism declineconcept2
  285. Environmental neurotoxicologyconcept2
  286. Environmental toxin contributionconcept2
  287. Epigenetic and genetic interplayconcept2
  288. Epigenetic Regulationconcept2
  289. Equilibrium at criticalityconcept2
  290. Existing HIV RT inhibitors as potential AD therapeuticsconcept2
  291. Exponential exposure-prevalence correlationconcept2
  292. Factor classification and connectivityconcept2
  293. Ferroptosisconcept2
  294. Ferroptosis in Neurodegenerationconcept2
  295. Functional model of neuron-glia interactionconcept2
  296. Gene dosage of APP directly causes pathogenesisconcept2
  297. Genetic shortcuts in FAD vs LOADconcept2
  298. GI-tract microbiome neurotoxicityconcept2
  299. Glial Biologyconcept2
  300. Glial contribution to neurodegenerationconcept2
  301. Glial inflammatory responseconcept2
  302. Glymphatic clearance failure amplifies pathologyconcept2
  303. Gut Brain Axisconcept2
  304. Gut Microbiome Lipid AD Axisconcept2
  305. Gut-brain axis in ADconcept2
  306. Human-germ interaction modelconcept2
  307. IDE-insulin-Abeta competitionconcept2
  308. Immunometabolismconcept2
  309. Immunosenescence as central aging mechanismconcept2
  310. Infection as co-factor in neurodegenerationconcept2
  311. Infectious etiology of ADconcept2
  312. Infectious origin of Alzheimer's diseaseconcept2
  313. Infectious-toxic-genetic synergyconcept2
  314. Inflamm-aging as disease driverconcept2
  315. Inflammaging integrates hallmarks of agingconcept2
  316. Information Theoretic Transcriptomicsconcept2
  317. Innate immune-mediated plaque formationconcept2
  318. Innate immunity network dysregulation in ADconcept2
  319. Integrated molecular-to-network perspectiveconcept2
  320. Integrative treatment across medical traditionsconcept2
  321. Interconnected homeostatic disruptionconcept2
  322. Intraneuronal amyloid accumulation as primary eventconcept2
  323. Iron Brain Paradoxconcept2
  324. Iron Dyshomeostasisconcept2
  325. Khachaturianpaper2
  326. Kinase Inhibitor Neuroprotectionconcept2
  327. Lifestyle and behavioral factorsconcept2
  328. Lifestyle as causal anchorconcept2
  329. Lifestyle intervention for cognitive reversalconcept2
  330. Lifestyle Microglial Modulationconcept2
  331. Limbic brain as circavital clock locusconcept2
  332. Lipid Dysregulationconcept2
  333. Lipid homeostasis as AD driverconcept2
  334. Locus coeruleus as ground zeroconcept2
  335. Many Causes, One Bottleneckpaper2
  336. Membrane Biophysicsconcept2
  337. Membrane Lipid Dysregulationconcept2
  338. Memory building frameworkconcept2
  339. Memory construction disease modelconcept2
  340. Metabolic dysfunction as AD driverconcept2
  341. Metabolic-neurodegenerative disease connectionconcept2
  342. Microbial Pathogenesisconcept2
  343. Microbleeds as initiating vascular event in ADconcept2
  344. Microglial dysfunction as early eventconcept2
  345. Microglial Immunometabolismconcept2
  346. Microglial Lipid Regulationconcept2
  347. Microglial senescence as AD triggerconcept2
  348. Mitochondrial Dysfunctionconcept2
  349. Mitochondrial inheritance and ADconcept2
  350. Mitochondrial theory of agingconcept2
  351. MMP-9 Inhibitors and the Phase III Therapeutic Windowpaper2
  352. Moving brain hypothesisconcept2
  353. MTHFR as catalytic pre-existing factorconcept2
  354. Multi-level heterogeneity of ADconcept2
  355. Multi-omics network approach to ADconcept2
  356. Multi-system medicine approach to ADconcept2
  357. Multidomain AD Interventionconcept2
  358. Multifactorial convergence modelconcept2
  359. Multifactorial etiologyconcept2
  360. Multifactorial risk accumulation modelconcept2
  361. Multipathology convergence theoryconcept2
  362. Multiple chronic stressorsconcept2
  363. Multiple converging factors in unified tauopathy frameworkconcept2
  364. NAD+ depletion drives neurodegenerationconcept2
  365. Navigable database of AD factorsconcept2
  366. Necrotic Cell Deathconcept2
  367. Need to understand normal APP functionconcept2
  368. Network-based combination therapyconcept2
  369. Neural Oscillationsconcept2
  370. Neuroendocrine shift at menopauseconcept2
  371. Neuroimmune Surveillanceconcept2
  372. Neuroinflammation as primary driver connecting all AD subsystemsconcept2
  373. Neuronal Excitabilityconcept2
  374. Neuronal lysis forming extracellular plaquesconcept2
  375. Neuronal network degradation as substrate of dementiaconcept2
  376. Neurovascular injury-repair cycle driving disease progressionconcept2
  377. Neurovascular unit as disease originconcept2
  378. NF-kB-miRNA inflammatory cascadeconcept2
  379. Nuclear pathology as early AD mechanismconcept2
  380. Omics Driven Profilingconcept2
  381. Omnigenic AD architectureconcept2
  382. Oral-brain infection axisconcept2
  383. Oxidative and nitrative stress as primary driverconcept2
  384. Oxidative Stressconcept2
  385. Oxygen deficiency as root causeconcept2
  386. P. gingivalis as keystone pathogenconcept2
  387. Peripheral Immunocyte Regulationconcept2
  388. Peripheral Lipid Biomarkersconcept2
  389. Peroxynitrite-mediated neurodegenerationconcept2
  390. Personalized multifactorial etiologyconcept2
  391. Polymicrobial brain infectionconcept2
  392. Polymicrobial causation of ADconcept2
  393. Precision genomics approachconcept2
  394. Precision Medicine ADconcept2
  395. Precision medicine protocolconcept2
  396. Preclinical Phase Activityconcept2
  397. Presymptomatic Lipidomic Signaturesconcept2
  398. Probabilistic multi-cause disease etiologyconcept2
  399. Programmed aging clock model of ADconcept2
  400. Proteostasis Collapseconcept2
  401. Proteostasis disruptionconcept2
  402. Psychosocial Risk Factorsconcept2
  403. Receptor-mediated amyloid internalizationconcept2
  404. Resilience as key to understanding AD clinical expressionconcept2
  405. Retrotransposon Activationconcept2
  406. Retroviral-like mechanisms drive disease propagationconcept2
  407. RNA-based diagnostics and therapeuticsconcept2
  408. Sex Dimorphic AD Mechanismsconcept2
  409. Sex Specific MiRNA Signaturesconcept2
  410. Sex-based hemoglobin differentialconcept2
  411. Sex-specific AD vulnerabilityconcept2
  412. Sex-specific disease mechanismsconcept2
  413. Signal Insufficiency Model (SIM)concept2
  414. Silica water as protective interventionconcept2
  415. Single Cell AD Signaturesconcept2
  416. Small ncRNA regulation of neurodegenerationconcept2
  417. Somatic Mosaicism in ADconcept2
  418. Somatic mutations as novel therapeutic targetsconcept2
  419. Somatic recombination creates pathogenic gene variantsconcept2
  420. SORL1 Lysosomal Functionconcept2
  421. Sphingolipid Signalingconcept2
  422. SuperAgers demonstrate pathology-cognition dissociationconcept2
  423. Synapse loss as primary eventconcept2
  424. Synaptic Competitionconcept2
  425. Synaptic Pathologyconcept2
  426. Synaptoblastic vs synaptoclastic balanceconcept2
  427. Syndromic Complexityconcept2
  428. Systemic circulating factors governing neurodegenerationconcept2
  429. Systemic disease beyond CNSconcept2
  430. Systemic disease interaction modelconcept2
  431. Systems approach to interconnected AD pathological hallmarksconcept2
  432. Tau as primary causative factor over amyloidconcept2
  433. Tau Biomarkersconcept2
  434. The Adult-born Neuronpaper2
  435. The Cellular Architecture of Collapsepaper2
  436. The Clearance Collapsepaper2
  437. The Pineal Interfacepaper2
  438. The Pv+/gamma Axispaper2
  439. Theory integration across domainsconcept2
  440. Three-actor-group pathogenesisconcept2
  441. Toxic Abeta species and PTMsconcept2
  442. Trained Immunityconcept2
  443. Transcriptomic Isoform Complexityconcept2
  444. TXNIP as therapeutic targetconcept2
  445. Vascular and inflammatory contributionsconcept2
  446. Vascular-metabolic-infectious convergenceconcept2
  447. Viral infection triggers chronic brain inflammationconcept2
  448. Why All Major Neurodegenerative Diseases Are the Same Diseasepaper2
  449. Why Decline Happens Suddenly, Not Graduallypaper2
  450. Wnt-GSK3-beta pathway integrating amyloid and tau pathologyconcept2
  451. Adrenergic Signalingconcept1
  452. Calcium Homeostasisconcept1
  453. Fischer's Matrixpaper1
  454. How Plaques Actually Formpaper1
  455. How α-Synuclein Spreads Through the Brainpaper1
  456. Huangpaper1
  457. Neuroimmune Interfacenode1
  458. Neuroinflammationconcept1
  459. Perineuronal Netsconcept1
  460. Perineuronal Nets, Microglial Neuroinflammation, and Alzheimer'spaper1
  461. The Biomarker Cascadepaper1
  462. The Compressed Architecturepaper1
  463. The Depression Continuumpaper1
  464. The Eight Stagespaper1
  465. The Energy-gated Tauopathypaper1
  466. The Fading Scorepaper1
  467. The Homeward Vectorpaper1
  468. The Immunometabolic Checkpointpaper1
  469. The INFLAMMASOME-COMPLEMENT-TREM2 Nexuspaper1
  470. The Senescent Frontpaper1
  471. The Single Cutpaper1
  472. The Staged Depositpaper1
  473. The Standing Relaypaper1
  474. The Trojan Neuroblastpaper1
  475. The Tryptophan Partitionpaper1
  476. The Unnetted Governorpaper1
  477. The Wax and the Weldpaper1
RELN Reelin, synapse & ECM–PNN 2,127 49 docs
Matched on RELN reelin
  1. The Architect's Reprievepaper277
  2. The Architect's Understudypaper197
  3. The Coerulean Shearspaper187
  4. The Load-Bearing Neuronpaper177
  5. The Architect's Handshakepaper162
  6. The Speck and the Architectpaper133
  7. The Architect's Scaffoldpaper116
  8. The First Emberpaper107
  9. The Crowded Cleftpaper93
  10. The Licensing Tyrosinepaper87
  11. The Coerulean Pincerpaper85
  12. The Bond not Madepaper62
  13. Reelin-ApoE receptor axis disruptionconcept53
  14. The Contested Serinepaper48
  15. The Return Legpaper32
  16. The Coerulean Clockpaper29
  17. The Unified Architecture of Collapsepaper26
  18. The Unthrown Switchpaper25
  19. The Architecture of Resistancepaper21
  20. The synapse that could not switch offpaper20
  21. Matrix Sulfation Nodeconcept17
  22. Ramsdenpaper16
  23. The Gardener's Restraintpaper16
  24. The Genetic Architecture of Neurodegenerationpaper16
  25. Perineuronal Netsconcept14
  26. The Unnetted Governorpaper13
  27. The Brake and the Bladepaper11
  28. Alzheimer's disease — a process in timepaper8
  29. Chronic Excitatory Insufficiencyconcept8
  30. The Fifty-year Prescriptionpaper8
  31. APOE4 Hubnode7
  32. The Fifth Surfacepaper6
  33. The Indifferent Neuronpaper6
  34. Low Signal, High Noisepaper5
  35. The Silenced Eraserpaper4
  36. ApoE4 structural vulnerabilityconcept3
  37. Immune-pathogen interaction modelconcept3
  38. Lipid peroxidation cascade at synapseconcept3
  39. Multi-cellular pathologyconcept3
  40. Neurovascular dysfunction as initiating eventconcept3
  41. Peroxidized ApoE as proximate causeconcept3
  42. Post-translational modification dysregulationconcept3
  43. The Honest Cascadepaper3
  44. The Two Anchorspaper3
  45. Adrenergic Signalingconcept2
  46. Synaptic Plasticityconcept2
  47. The Double Releasepaper2
  48. Moosmann & Sohrepaper1
  49. The Losing Axonpaper1
APP Amyloid & Tau core 1,243 192 docs
Matched on amyloid precursor protein APP
  1. The Compressed Architecturepaper60
  2. The Return Legpaper60
  3. Many Causes, One Bottleneckpaper52
  4. The Master Theorypaper44
  5. The Acid Testpaper33
  6. How Plaques Actually Formpaper32
  7. The Mitochondrion as Nexuspaper26
  8. Causal and Commonpaper23
  9. Gouraspaper23
  10. The Uncleared Signalpaper23
  11. How to Fix the Broken Recycling Systempaper22
  12. The Narrow Gatepaper22
  13. How Free Radicals Disable the Recycling Systempaper20
  14. The Case for the Cascadepaper20
  15. The Unthrown Switchpaper20
  16. The Genetic Architecture of Neurodegenerationpaper19
  17. The Therapeutic Landscape of Collapsepaper19
  18. Is the ER–Mitochondria Contact Site the Real Driver?paper16
  19. Smallpaper16
  20. Testing a Popular Treatment Protocolpaper16
  21. The Architecture of Resistancepaper16
  22. The Load-Bearing Lipidpaper16
  23. The Losing Axonpaper16
  24. The Same Machinepaper15
  25. The Fifty-year Prescriptionpaper14
  26. The Honest Cascadepaper14
  27. The Indifferent Neuronpaper14
  28. Why the Cell's Recycling System Breakspaper14
  29. Comparing Different Viral Triggerspaper13
  30. Why Decline Happens Suddenly, Not Graduallypaper13
  31. The Unpicked Seampaper12
  32. The Wax and the Weldpaper12
  33. How 1907 Observations Predict Modern Findingspaper11
  34. Moosmann & Sohrepaper11
  35. The Trojan Neuroblastpaper11
  36. Can Vaccines Protect Against Dementia?paper10
  37. Proving That Misfolded Proteins Spread Like Prionspaper10
  38. The Coerulean Clockpaper10
  39. Why Damaged Mitochondria Can't Be Clearedpaper10
  40. Huangpaper9
  41. Iron Chelation and GPX4 Stabilizationpaper9
  42. The Geode and the Flowerpaper9
  43. The Janus Lipidpaper8
  44. The Switch and the Sievepaper8
  45. The Unnetted Governorpaper8
  46. AD caused by APP dysregulation not Abeta per seconcept7
  47. APP and tau pathology linked through transport disruptionconcept7
  48. Gene dosage of APP directly causes pathogenesisconcept7
  49. Mapping the Vascular Dimension Onto the Genetic Dimensionpaper7
  50. Need to understand normal APP functionconcept7
  51. The Bond not Madepaper7
  52. BIOENERGETIC COLLAPSE (Revised)paper6
  53. Endosomal Traffickingconcept6
  54. Khachaturianpaper6
  55. Plaques Are Tombstones, Not Killerspaper6
  56. Rappoportpaper6
  57. The Licensing Tyrosinepaper6
  58. The Spectrum of Collapsepaper6
  59. The Unified Architecture of Collapsepaper6
  60. APP as dependence receptorconcept5
  61. Axon initial segment as key disease locusconcept5
  62. Axonal transport failure as unifying mechanismconcept5
  63. CDK3 Cell Cycle Toxicityconcept5
  64. Dynamic and region-independent disease mechanismsconcept5
  65. Kinase Inhibitor Neuroprotectionconcept5
  66. Neuronal network degradation as substrate of dementiaconcept5
  67. Plaque Origin What is Establishedconcept5
  68. Ramsdenpaper5
  69. APP processing pathwayconcept4
  70. Chronic Excitatory Insufficiencyconcept4
  71. Khachaturianpaper4
  72. Low Signal, High Noisepaper4
  73. MMP-9 Inhibitors and the Phase III Therapeutic Windowpaper4
  74. One Mechanism, Many Diseases (AD, PD, ALS, HD)paper4
  75. The Architect's Reprievepaper4
  76. The Brake and the Bladepaper4
  77. The Crowded Cleftpaper4
  78. The Expected Eventpaper4
  79. The Price and the Permissionpaper4
  80. The Single Cutpaper4
  81. The Temporal Architecture of Collapsepaper4
  82. The Viral Trajectorypaper4
  83. TOMM40 Import Gateconcept4
  84. Vaccines That May Prevent Dementiapaper4
  85. Why All Major Neurodegenerative Diseases Are the Same Diseasepaper4
  86. Alzheimer's disease — a process in timepaper3
  87. Astrocytespaper3
  88. Brain DNA blueprint is altered in AD neuronsconcept3
  89. Endosomal Nexusnode3
  90. Existing HIV RT inhibitors as potential AD therapeuticsconcept3
  91. Fischer's Sideliningpaper3
  92. Multidomain AD Interventionconcept3
  93. Precision Medicine ADconcept3
  94. Precision medicine protocolconcept3
  95. Retroviral-like mechanisms drive disease propagationconcept3
  96. Signal Insufficiency Model (SIM)concept3
  97. Somatic Mosaicism in ADconcept3
  98. Somatic recombination creates pathogenic gene variantsconcept3
  99. Synaptoblastic vs synaptoclastic balanceconcept3
  100. Terminal Collapsepaper3
  101. The Architect's Handshakepaper3
  102. The Load-Bearing Neuronpaper3
  103. The Scheduled Withdrawalpaper3
  104. The Sensor and the Speckpaper3
  105. The Speck and the Architectpaper3
  106. The Two Anchorspaper3
  107. Transcriptomic Isoform Complexityconcept3
  108. Amyloid structural diversity and toxicityconcept2
  109. Autophagyconcept2
  110. Denervation supersensitivityconcept2
  111. Disciplinary Silos in Alzheimer's Disease Research, 1950–2020paper2
  112. Endolysosomal Dysfunctionconcept2
  113. Epigenetic Repressionconcept2
  114. Ferroptosisconcept2
  115. How the Brain's Clearance System Becomes the Disease's Highwaypaper2
  116. Lipid Metabolismconcept2
  117. Lysosomal Acidificationconcept2
  118. Margolispaper2
  119. Oligomer hypothesis of neurotoxicityconcept2
  120. One Sensor, Two Collapsespaper2
  121. Plaque-cognition dissociationconcept2
  122. Selective Tau Disruptionconcept2
  123. Standard Diagnostic Biomarkers Explainedpaper2
  124. Tau Scaffolding Interactionsconcept2
  125. The Architect's Understudypaper2
  126. The Brain's Own Antimicrobial Defensepaper2
  127. The Cellular Architecture of Collapsepaper2
  128. The Clearance Collapsepaper2
  129. The Coerulean Interfacepaper2
  130. The Corruption of the Gardenerpaper2
  131. The Depression Continuumpaper2
  132. The Double Releasepaper2
  133. The Gamma Interventionpaper2
  134. The Ketamine Paradoxpaper2
  135. The Peacekeeper's Paradoxpaper2
  136. Vesicular Traffickingconcept2
  137. When Myelin's Caretakers Failpaper2
  138. Abeta aggregation as necessary initiating eventconcept1
  139. AG18051 and the Aβ–ABAD Complexpaper1
  140. Aluminum as primary environmental causeconcept1
  141. Aluminum driving amyloid productionconcept1
  142. Amyloid and tau as secondary phenomenaconcept1
  143. Autophagy-lysosomal failureconcept1
  144. Axonal Transportconcept1
  145. Cholesterol Homeostasisconcept1
  146. Cholinergic primacy in ADconcept1
  147. Convergent Synaptic Collapse (CSC) — Grading Referencepaper1
  148. Epigenetic regulation of AD genesconcept1
  149. ER Stressconcept1
  150. Exponential exposure-prevalence correlationconcept1
  151. Ferroptosis in Neurodegenerationconcept1
  152. From Synapse Loss to Neuronal Death in Alzheimer's Diseasepaper1
  153. Genetic evidence as gold standard for causalityconcept1
  154. Gut-brain axis in neuroinflammationconcept1
  155. Iron Brain Paradoxconcept1
  156. Iron Dyshomeostasisconcept1
  157. Long preclinical phase of AD pathologyconcept1
  158. Lysosomal Dysfunctionconcept1
  159. Microglial Lipid Regulationconcept1
  160. Mitochondrial Dysfunctionconcept1
  161. Multi-pathway AD pathophysiology reviewconcept1
  162. Multifactorial modulation of disease trajectoryconcept1
  163. NAD⁺ Restoration and CD38 Inhibitionpaper1
  164. Oxidative Stressconcept1
  165. PANTHOSconcept1
  166. Perineuronal Nets, Microglial Neuroinflammation, and Alzheimer'spaper1
  167. Peripheral Lipid Biomarkersconcept1
  168. PERK DLX1 Tau Axisconcept1
  169. Presymptomatic Lipidomic Signaturesconcept1
  170. Receptor-based therapeutic approachconcept1
  171. Silica water as protective interventionconcept1
  172. The Adult-born Neuronpaper1
  173. The Architect's Scaffoldpaper1
  174. The Coerulean Pincerpaper1
  175. The Coerulean Shearspaper1
  176. The Contested Serinepaper1
  177. The Fermented Prodromepaper1
  178. The First Emberpaper1
  179. The Homeward Vectorpaper1
  180. The INFLAMMASOME-COMPLEMENT-TREM2 Nexuspaper1
  181. The Locus Coeruleus & the Noradrenergic Prodromepaper1
  182. The Locus Coeruleus Bridgepaper1
  183. The Proteolytic Turnpaper1
  184. The Restorative Intervalpaper1
  185. The Silenced Eraserpaper1
  186. The synapse that could not switch offpaper1
  187. The Vascular Dimensionpaper1
  188. Translational Regulation in Tauopathyconcept1
  189. What If We'd Listened to Fischer?paper1
  190. When Poor Blood Flow Causes Dementiapaper1
  191. When the Brain's Immune Cells Turn Toxicpaper1
  192. Why HMS Becomes HMS+Ppaper1
TREM2 GWAS / LOAD risk 827 89 docs
Matched on s?TREM2
  1. Homeostatic Microglial Collapsepaper61
  2. The Microglial Thesis (Downloadable PDF)paper61
  3. The Genetic Architecture of Neurodegenerationpaper59
  4. The Biomarker Cascadepaper56
  5. The Unrepaired Breachpaper49
  6. The Fifth Surfacepaper44
  7. The Architecture of Resistancepaper33
  8. The Losing Axonpaper33
  9. The Gardener's Restraintpaper32
  10. The INFLAMMASOME-COMPLEMENT-TREM2 Nexuspaper31
  11. The Corruption of the Gardenerpaper28
  12. The Homeostatic–Matrix–Synaptic (HMS) Collapse Modelpaper27
  13. The Peripheral Arm of Homeostatic Collapsepaper26
  14. When the Brain's Immune Cells Turn Toxicpaper22
  15. The Return Legpaper17
  16. The Brake and the Bladepaper13
  17. The Staged Depositpaper13
  18. The DAM Trajectory and the Matrix-degrading Armpaper11
  19. The Temporal Architecture of Collapsepaper10
  20. Mapping the Vascular Dimension Onto the Genetic Dimensionpaper9
  21. Shatz & Brottpaper9
  22. The Silenced Eraserpaper9
  23. Disciplinary Silos in Alzheimer's Disease Research, 1950–2020paper8
  24. Alzheimer's disease — a process in timepaper7
  25. BIOENERGETIC COLLAPSE (Revised)paper7
  26. The Clearance Collapsepaper7
  27. The Eight Stagespaper7
  28. The Therapeutic Landscape of Collapsepaper7
  29. The Unified Architecture of Collapsepaper7
  30. The Mitochondrion as Nexuspaper6
  31. Metabolic-Homeostatic Axisnode5
  32. The Brain's Own Antimicrobial Defensepaper5
  33. The Cellular Architecture of Collapsepaper5
  34. The Sensor and the Speckpaper5
  35. Ferroptosis and the Phase II Oligodendrocyte Crisispaper4
  36. Is the ER–Mitochondria Contact Site the Real Driver?paper4
  37. MMP-9 Inhibitors and the Phase III Therapeutic Windowpaper4
  38. Neuroinflammationconcept4
  39. The Load-Bearing Lipidpaper4
  40. The Viral Trajectorypaper4
  41. Huangpaper3
  42. Smallpaper3
  43. The Honest Cascadepaper3
  44. Why HMS Becomes HMS+Ppaper3
  45. Bioenergeticsconcept2
  46. Chronobiologic neuroprotection via melatoninconcept2
  47. Cognitive resilience as dynamic protective conceptconcept2
  48. Convergent Synaptic Collapse (CSC) — Grading Referencepaper2
  49. Homeostatic Microglial Collapseconcept2
  50. How to Fix the Broken Recycling Systempaper2
  51. Multifactorial prevention through modifiable risk factorsconcept2
  52. Neuroimmune Interfacenode2
  53. Perineuronal Nets, Microglial Neuroinflammation, and Alzheimer'spaper2
  54. Plaques Are Tombstones, Not Killerspaper2
  55. Population-specific AD genetic signaturesconcept2
  56. The Double Releasepaper2
  57. The Geode and the Flowerpaper2
  58. The Proteolytic Turnpaper2
  59. The Time to Retractpaper2
  60. The Tryptophan Partitionpaper2
  61. The Vascular Phasingpaper2
  62. Age-related immune dysfunction enables neurotropic virusesconcept1
  63. Can Vaccines Protect Against Dementia?paper1
  64. cognitive resilienceconcept1
  65. Eight factors of dementia frameworkconcept1
  66. Glymphatic clearance failure amplifies pathologyconcept1
  67. Innate Immunityconcept1
  68. Integrative treatment across medical traditionsconcept1
  69. Many Causes, One Bottleneckpaper1
  70. Microglial dysfunction as early eventconcept1
  71. Moosmann & Sohrepaper1
  72. Multi-system medicine approach to ADconcept1
  73. Multiple converging factors in unified tauopathy frameworkconcept1
  74. Neuroimmunologyconcept1
  75. Neuroinflammation as primary driver connecting all AD subsystemsconcept1
  76. Perineuronal Netsconcept1
  77. Ramsdenpaper1
  78. Rappoportpaper1
  79. Standard Diagnostic Biomarkers Explainedpaper1
  80. Systems approach to interconnected AD pathological hallmarksconcept1
  81. Tau as primary causative factor over amyloidconcept1
  82. The Acid Testpaper1
  83. The Complement-pruning Substratepaper1
  84. The Depression Continuumpaper1
  85. The Unnetted Governorpaper1
  86. Vaccines That May Prevent Dementiapaper1
  87. Vascular and inflammatory contributionsconcept1
  88. Viral infection triggers chronic brain inflammationconcept1
  89. When Myelin's Caretakers Failpaper1
NLRP3 Microglia & innate immunity 594 65 docs
Matched on NLRP3
  1. The Sensor and the Speckpaper94
  2. The Therapeutic Landscape of Collapsepaper69
  3. The INFLAMMASOME-COMPLEMENT-TREM2 Nexuspaper42
  4. One Sensor, Two Collapsespaper36
  5. The Mitochondrion as Nexuspaper35
  6. The Speck and the Architectpaper34
  7. The Net and the Speckpaper33
  8. BIOENERGETIC COLLAPSE (Revised)paper27
  9. The Ketamine Paradoxpaper27
  10. The Silenced Eraserpaper22
  11. The Depression Continuumpaper21
  12. Terminal Collapsepaper14
  13. The Corruption of the Gardenerpaper14
  14. The Proteolytic Turnpaper12
  15. How to Fix the Broken Recycling Systempaper9
  16. The Clearance Collapsepaper7
  17. The Spectrum of Collapsepaper7
  18. The Temporal Architecture of Collapsepaper6
  19. The Cell's Garbage System Controls Agingpaper5
  20. The Price and the Permissionpaper5
  21. Why Damaged Mitochondria Can't Be Clearedpaper5
  22. The Fermented Prodromepaper4
  23. When the Brain's Immune Cells Turn Toxicpaper4
  24. Can Vaccines Protect Against Dementia?paper3
  25. The Brain's Own Antimicrobial Defensepaper3
  26. The Losing Axonpaper3
  27. Age-related immune dysfunction enables neurotropic virusesconcept2
  28. Alzheimer's disease — a process in timepaper2
  29. Homeostatic Microglial Collapseconcept2
  30. Many Causes, One Bottleneckpaper2
  31. Neuroinflammationconcept2
  32. Neuroinflammation as primary driver connecting all AD subsystemsconcept2
  33. Systems approach to interconnected AD pathological hallmarksconcept2
  34. Tau Pathologyconcept2
  35. The Complement-pruning Substratepaper2
  36. The Compressed Architecturepaper2
  37. The Load-Bearing Lipidpaper2
  38. The Unified Architecture of Collapsepaper2
  39. The Unrepaired Breachpaper2
  40. Viral infection triggers chronic brain inflammationconcept2
  41. Astrocytespaper1
  42. Autophagyconcept1
  43. Cellular Senescenceconcept1
  44. Cholesterol Homeostasisconcept1
  45. Energy metabolism declineconcept1
  46. Epigenetic and genetic interplayconcept1
  47. Ferroptosis and the Phase II Oligodendrocyte Crisispaper1
  48. Homeostatic Microglial Collapsepaper1
  49. Innate Immunityconcept1
  50. Lifestyle and behavioral factorsconcept1
  51. Multifactorial etiologyconcept1
  52. Neuroimmunologyconcept1
  53. The Cellular Architecture of Collapsepaper1
  54. The DAM Trajectory and the Matrix-degrading Armpaper1
  55. The Microglial Thesis (Downloadable PDF)paper1
  56. The Pv+/gamma Axispaper1
  57. The Restorative Intervalpaper1
  58. The Return Legpaper1
  59. The Senescent Frontpaper1
  60. The Single Cutpaper1
  61. The Two Anchorspaper1
  62. The Unnetted Governorpaper1
  63. When Myelin's Caretakers Failpaper1
  64. Why Decline Happens Suddenly, Not Graduallypaper1
  65. Why HMS Becomes HMS+Ppaper1
SST (somatostatin) Neuromodulator / circadian / kynurenine 586 25 docs
V-ATPase (ATP6V) Autophagy / lysosome / clearance 577 75 docs
Matched on V-ATPase ATP6V vacuolar[- ]?(?:type )?ATPase
  1. Many Causes, One Bottleneckpaper59
  2. Why the Cell's Recycling System Breakspaper42
  3. Testing a Popular Treatment Protocolpaper37
  4. How Free Radicals Disable the Recycling Systempaper29
  5. Khachaturianpaper23
  6. One Mechanism, Many Diseases (AD, PD, ALS, HD)paper23
  7. The Acid Testpaper22
  8. Lysosomal Acidificationconcept21
  9. The Master Theorypaper21
  10. How Plaques Actually Formpaper20
  11. When Poor Blood Flow Causes Dementiapaper20
  12. How 1907 Observations Predict Modern Findingspaper17
  13. The Pv+/gamma Axispaper15
  14. Why Decline Happens Suddenly, Not Graduallypaper15
  15. Comparing Different Viral Triggerspaper13
  16. How to Fix the Broken Recycling Systempaper12
  17. Terminal Collapsepaper12
  18. The Mitochondrion as Nexuspaper12
  19. The Clearance Collapsepaper11
  20. Disciplinary Silos in Alzheimer's Disease Research, 1950–2020paper8
  21. The Trojan Neuroblastpaper8
  22. Bioenergeticsconcept7
  23. The Return Legpaper7
  24. Autophagyconcept6
  25. Calcium Homeostasisconcept6
  26. Cholesterol Homeostasisconcept5
  27. Ferroptosisconcept5
  28. Lysosomal Dysfunctionconcept5
  29. The Genetic Architecture of Neurodegenerationpaper5
  30. The Geode and the Flowerpaper5
  31. Mitochondrial Dysfunctionconcept4
  32. Plaques Are Tombstones, Not Killerspaper4
  33. BIOENERGETIC COLLAPSE (Revised)paper3
  34. Endosomal Traffickingconcept3
  35. Gouraspaper3
  36. Is the ER–Mitochondria Contact Site the Real Driver?paper3
  37. Lipid Metabolismconcept3
  38. Lipid Peroxidationconcept3
  39. Anti Ferroptotic Botanicalsconcept2
  40. Antimicrobial Defenseconcept2
  41. Autophagic Collapseconcept2
  42. BCG Immune Checkpoint Modulationconcept2
  43. Brain Lipid Homeostasis Restorationconcept2
  44. Cannabinoid Neuroprotectionconcept2
  45. Dietary Fatty Acid APOE4 Rescueconcept2
  46. Endolysosomal Dysfunctionconcept2
  47. Endosomal Nexusnode2
  48. Gut Brain Axisconcept2
  49. Immunometabolismconcept2
  50. Lipid Transportconcept2
  51. Membrane Biologyconcept2
  52. Microglial Immunometabolismconcept2
  53. Neuroinflammationconcept2
  54. Oxidative Stressconcept2
  55. Peripheral Immunocyte Regulationconcept2
  56. Synaptic Competitionconcept2
  57. The Biomarker Cascadepaper2
  58. The Uncleared Signalpaper2
  59. The Unrepaired Breachpaper2
  60. Trained Immunityconcept2
  61. Viral Pathogenesisconcept2
  62. Autophagic Fluxconcept1
  63. Convergent Synaptic Collapse (CSC) — Grading Referencepaper1
  64. Energy Metabolismconcept1
  65. ER Stressconcept1
  66. Fischer's Sideliningpaper1
  67. Glial Biologyconcept1
  68. Metabolic-Homeostatic Axisnode1
  69. Microbial Pathogenesisconcept1
  70. Neural Oscillationsconcept1
  71. Iron Chelation and GPX4 Stabilizationpaper1
  72. Proteostasis Collapseconcept1
  73. The Tryptophan Partitionpaper1
  74. TOMM40 Import Gateconcept1
  75. When the Brain's Immune Cells Turn Toxicpaper1
LILRB2 GWAS / LOAD risk 563 31 docs
PSEN1 Amyloid & Tau core 563 138 docs
Matched on PSEN1 PS1 presenilin[- ]?1
  1. The Master Theorypaper44
  2. Many Causes, One Bottleneckpaper37
  3. How to Fix the Broken Recycling Systempaper25
  4. Why Decline Happens Suddenly, Not Graduallypaper23
  5. The Uncleared Signalpaper20
  6. The Genetic Architecture of Neurodegenerationpaper19
  7. Iron Chelation and GPX4 Stabilizationpaper15
  8. Why the Cell's Recycling System Breakspaper14
  9. Khachaturianpaper13
  10. How Plaques Actually Formpaper12
  11. Testing a Popular Treatment Protocolpaper12
  12. Comparing Different Viral Triggerspaper11
  13. Khachaturianpaper11
  14. The Mitochondrion as Nexuspaper11
  15. BIOENERGETIC COLLAPSE (Revised)paper10
  16. How 1907 Observations Predict Modern Findingspaper10
  17. Moosmann & Sohrepaper10
  18. The Acid Testpaper10
  19. The Therapeutic Landscape of Collapsepaper9
  20. How Free Radicals Disable the Recycling Systempaper8
  21. The Indifferent Neuronpaper8
  22. The Load-Bearing Lipidpaper7
  23. The Return Legpaper7
  24. What If We'd Listened to Fischer?paper7
  25. When Myelin's Caretakers Failpaper7
  26. One Mechanism, Many Diseases (AD, PD, ALS, HD)paper6
  27. The Fifty-year Prescriptionpaper6
  28. The Geode and the Flowerpaper6
  29. The Unpicked Seampaper6
  30. Can Vaccines Protect Against Dementia?paper5
  31. The Architect's Understudypaper5
  32. Mapping the Vascular Dimension Onto the Genetic Dimensionpaper4
  33. The Architect's Reprievepaper4
  34. The Expected Eventpaper4
  35. The Honest Cascadepaper4
  36. The Licensing Tyrosinepaper4
  37. The Losing Axonpaper4
  38. Vaccines That May Prevent Dementiapaper4
  39. Astrocytespaper3
  40. The Brake and the Bladepaper3
  41. The Clearance Collapsepaper3
  42. The Crowded Cleftpaper3
  43. The Load-Bearing Neuronpaper3
  44. The Sensor and the Speckpaper3
  45. The Unnetted Governorpaper3
  46. Why Damaged Mitochondria Can't Be Clearedpaper3
  47. Calcium Homeostasisconcept2
  48. Compensatory Homeostasisconcept2
  49. Excitatory Neurotransmissionconcept2
  50. Ferroptosisconcept2
  51. Lysosomal Acidificationconcept2
  52. MMP-9 Inhibitors and the Phase III Therapeutic Windowpaper2
  53. One Sensor, Two Collapsespaper2
  54. Plaques Are Tombstones, Not Killerspaper2
  55. Smallpaper2
  56. Standard Diagnostic Biomarkers Explainedpaper2
  57. Synaptic Physiologyconcept2
  58. Terminal Collapsepaper2
  59. The Architecture of Resistancepaper2
  60. The Bond not Madepaper2
  61. The Case for the Cascadepaper2
  62. The Contested Serinepaper2
  63. The Corruption of the Gardenerpaper2
  64. The Depression Continuumpaper2
  65. The Gamma Interventionpaper2
  66. The Ketamine Paradoxpaper2
  67. The Peacekeeper's Paradoxpaper2
  68. The Speck and the Architectpaper2
  69. The Unrepaired Breachpaper2
  70. The Unthrown Switchpaper2
  71. The Wax and the Weldpaper2
  72. Abeta aggregation as necessary initiating eventconcept1
  73. AG18051 and the Aβ–ABAD Complexpaper1
  74. APOE4 Hubnode1
  75. APP and tau pathology linked through transport disruptionconcept1
  76. Autophagic Collapseconcept1
  77. Autophagyconcept1
  78. Autophagy-lysosomal failureconcept1
  79. Axonal transport failure as unifying mechanismconcept1
  80. Causal and Commonpaper1
  81. Chronic Excitatory Insufficiencyconcept1
  82. Dynamic and region-independent disease mechanismsconcept1
  83. Endosomal Nexusnode1
  84. Environmental neurotoxicologyconcept1
  85. Epigenetic regulation of AD genesconcept1
  86. Ferroptosis in Neurodegenerationconcept1
  87. Fischer's Sideliningpaper1
  88. Gene dosage of APP directly causes pathogenesisconcept1
  89. Genetic evidence as gold standard for causalityconcept1
  90. Gut-brain axis in ADconcept1
  91. Gut-brain axis in neuroinflammationconcept1
  92. How the Brain's Clearance System Becomes the Disease's Highwaypaper1
  93. Iron Brain Paradoxconcept1
  94. Iron Dyshomeostasisconcept1
  95. Is the ER–Mitochondria Contact Site the Real Driver?paper1
  96. Lipid Metabolismconcept1
  97. Lipid Peroxidationconcept1
  98. Long preclinical phase of AD pathologyconcept1
  99. Lysosomal Dysfunctionconcept1
  100. Mapping 1907 Terms to Modern Sciencepaper1
  101. Metabolic-neurodegenerative disease connectionconcept1
  102. Multi-pathway AD pathophysiology reviewconcept1
  103. Multifactorial modulation of disease trajectoryconcept1
  104. NAD⁺ Restoration and CD38 Inhibitionpaper1
  105. Perineuronal Nets, Microglial Neuroinflammation, and Alzheimer'spaper1
  106. PERK DLX1 Tau Axisconcept1
  107. Rappoportpaper1
  108. Reelin-ApoE receptor axis disruptionconcept1
  109. Synaptic Pathologyconcept1
  110. The Adult-born Neuronpaper1
  111. The Architect's Handshakepaper1
  112. The Architect's Scaffoldpaper1
  113. The Brain's Own Antimicrobial Defensepaper1
  114. The Coerulean Interfacepaper1
  115. The Coerulean Pincerpaper1
  116. The Coerulean Shearspaper1
  117. The Double Releasepaper1
  118. The Fermented Prodromepaper1
  119. The Fifth Surfacepaper1
  120. The Gardener's Restraintpaper1
  121. The INFLAMMASOME-COMPLEMENT-TREM2 Nexuspaper1
  122. The Janus Lipidpaper1
  123. The Locus Coeruleus Bridgepaper1
  124. The Price and the Permissionpaper1
  125. The Proteolytic Turnpaper1
  126. The Pv+/gamma Axispaper1
  127. The Restorative Intervalpaper1
  128. The Same Machinepaper1
  129. The Scheduled Withdrawalpaper1
  130. The Silenced Eraserpaper1
  131. The Single Cutpaper1
  132. The Spectrum of Collapsepaper1
  133. The synapse that could not switch offpaper1
  134. The Temporal Architecture of Collapsepaper1
  135. The Unified Architecture of Collapsepaper1
  136. Translational Regulation in Tauopathyconcept1
  137. TXNIP as therapeutic targetconcept1
  138. Why HMS Becomes HMS+Ppaper1
PVALB (parvalbumin) Reelin, synapse & ECM–PNN 561 70 docs
Matched on PVALB parvalbumin
  1. The Perineuronal Turnpaper44
  2. The Unnetted Governorpaper42
  3. The Cellular Architecture of Collapsepaper31
  4. The Matrix of Collapsepaper30
  5. Fischer's Matrixpaper23
  6. The Temporal Architecture of Collapsepaper23
  7. The Gamma Interventionpaper20
  8. The Adult-born Neuronpaper19
  9. The Load-Bearing Neuronpaper18
  10. The Net and the Speckpaper17
  11. One Sensor, Two Collapsespaper14
  12. The Genetic Architecture of Neurodegenerationpaper14
  13. The Homeward Vectorpaper14
  14. The Price and the Permissionpaper14
  15. The Vascular Phasingpaper14
  16. The Proteolytic Turnpaper13
  17. Terminal Collapsepaper12
  18. The Peripheral Arm of Homeostatic Collapsepaper11
  19. The Senescent Frontpaper11
  20. The Unified Architecture of Collapsepaper11
  21. Low Signal, High Noisepaper10
  22. MMP-9 Inhibitors and the Phase III Therapeutic Windowpaper8
  23. The Architect's Scaffoldpaper8
  24. The Contested Serinepaper8
  25. The Double Releasepaper8
  26. The Fifth Surfacepaper8
  27. The Crowded Cleftpaper7
  28. The Compressed Architecturepaper6
  29. The Fermented Prodromepaper6
  30. The Ketamine Paradoxpaper6
  31. Homeostatic Microglial Collapsepaper5
  32. The Homeostatic–Matrix–Synaptic (HMS) Collapse Modelpaper5
  33. The Microglial Thesis (Downloadable PDF)paper5
  34. The Restorative Intervalpaper5
  35. The Vascular Dimensionpaper5
  36. The Licensing Tyrosinepaper4
  37. Disciplinary Silos in Alzheimer's Disease Research, 1950–2020paper3
  38. Mapping the Vascular Dimension Onto the Genetic Dimensionpaper3
  39. Perineuronal Nets, Microglial Neuroinflammation, and Alzheimer'spaper3
  40. The Eight Stagespaper3
  41. The Locus Coeruleus Bridgepaper3
  42. The Pv+/gamma Axispaper3
  43. The Speck and the Architectpaper3
  44. The Spectrum of Collapsepaper3
  45. The Therapeutic Landscape of Collapsepaper3
  46. The Trojan Neuroblastpaper3
  47. The Viral Trajectorypaper3
  48. BIOENERGETIC COLLAPSE (Revised)paper2
  49. Convergent Synaptic Collapseconcept2
  50. Homeostatic Microglial Collapseconcept2
  51. The Biomarker Cascadepaper2
  52. The DAM Trajectory and the Matrix-degrading Armpaper2
  53. The Two Anchorspaper2
  54. Adrenergic Signalingconcept1
  55. Alzheimer's disease — a process in timepaper1
  56. Bioenergetic Collapseconcept1
  57. Ecce Homopaper1
  58. Energy Metabolismconcept1
  59. LC Morphology What is Establishedconcept1
  60. Moosmann & Sohrepaper1
  61. Neural Oscillationsconcept1
  62. PARP Inhibitors and the Locus Coeruleuspaper1
  63. Perineuronal Netsconcept1
  64. Phase Measurabilityconcept1
  65. Reelin-ApoE receptor axis disruptionconcept1
  66. The Acid Testpaper1
  67. The Mitochondrion as Nexuspaper1
  68. The Staged Depositpaper1
  69. The synapse that could not switch offpaper1
  70. Why HMS Becomes HMS+Ppaper1
LRP8 (ApoER2) Reelin, synapse & ECM–PNN 525 54 docs
Matched on LRP8 ApoER2 APOER2
  1. The Bond not Madepaper81
  2. The Load-Bearing Neuronpaper51
  3. Ramsdenpaper45
  4. The Architect's Understudypaper37
  5. The Coerulean Shearspaper35
  6. The Licensing Tyrosinepaper32
  7. The Return Legpaper32
  8. The Architect's Handshakepaper30
  9. The Crowded Cleftpaper19
  10. The Architect's Reprievepaper17
  11. The Coerulean Pincerpaper13
  12. The Speck and the Architectpaper12
  13. Iron Chelation and GPX4 Stabilizationpaper11
  14. Reelin-ApoE receptor axis disruptionconcept10
  15. The Contested Serinepaper10
  16. The synapse that could not switch offpaper9
  17. The Architect's Scaffoldpaper7
  18. The Brake and the Bladepaper6
  19. Alzheimer's disease — a process in timepaper5
  20. The Homeostatic–Matrix–Synaptic (HMS) Collapse Modelpaper5
  21. The Unthrown Switchpaper5
  22. Chronic Excitatory Insufficiencyconcept4
  23. The First Emberpaper4
  24. Lipid Peroxidationconcept3
  25. Low Signal, High Noisepaper3
  26. The Genetic Architecture of Neurodegenerationpaper3
  27. The Matrix of Collapsepaper3
  28. The Unified Architecture of Collapsepaper3
  29. APOE4 Hubnode2
  30. Convergent Synaptic Collapse (CSC) — Grading Referencepaper2
  31. Endosomal Nexusnode2
  32. Ferroptosisconcept2
  33. Adrenergic Signalingconcept1
  34. ApoE4 structural vulnerabilityconcept1
  35. Cholesterol Homeostasisconcept1
  36. Convergent Synaptic Collapseconcept1
  37. Ferroptosis in Neurodegenerationconcept1
  38. Immune-pathogen interaction modelconcept1
  39. Iron Brain Paradoxconcept1
  40. Iron Dyshomeostasisconcept1
  41. Lipid peroxidation cascade at synapseconcept1
  42. Matrix Sulfation Nodeconcept1
  43. Moosmann & Sohrepaper1
  44. Multi-cellular pathologyconcept1
  45. Neurovascular dysfunction as initiating eventconcept1
  46. Perineuronal Netsconcept1
  47. Peroxidized ApoE as proximate causeconcept1
  48. Post-translational modification dysregulationconcept1
  49. Terminal Collapsepaper1
  50. The Architecture of Resistancepaper1
  51. The Coerulean Clockpaper1
  52. The Fifty-year Prescriptionpaper1
  53. The Temporal Architecture of Collapsepaper1
  54. The Unnetted Governorpaper1
MMP9 Reelin, synapse & ECM–PNN 477 55 docs
Matched on MMP-?9
  1. The Coerulean Shearspaper92
  2. MMP-9 Inhibitors and the Phase III Therapeutic Windowpaper91
  3. Mapping the Vascular Dimension Onto the Genetic Dimensionpaper30
  4. Telling Different Dementias Apartpaper30
  5. The Therapeutic Landscape of Collapsepaper23
  6. The DAM Trajectory and the Matrix-degrading Armpaper20
  7. The Genetic Architecture of Neurodegenerationpaper20
  8. The Losing Axonpaper19
  9. The Proteolytic Turnpaper18
  10. The Vascular Phasingpaper15
  11. The Viral Trajectorypaper11
  12. The Gamma Interventionpaper6
  13. The Vascular Dimensionpaper6
  14. Why HMS Becomes HMS+Ppaper6
  15. Huangpaper5
  16. The Matrix of Collapsepaper5
  17. The Net and the Speckpaper5
  18. Disciplinary Silos in Alzheimer's Disease Research, 1950–2020paper4
  19. The Architect's Scaffoldpaper4
  20. The Homeostatic–Matrix–Synaptic (HMS) Collapse Modelpaper4
  21. Fischer's Matrixpaper3
  22. Homeostatic Microglial Collapsepaper3
  23. The Adult-born Neuronpaper3
  24. The Coerulean Pincerpaper3
  25. The Compressed Architecturepaper3
  26. The Depression Continuumpaper3
  27. The Microglial Thesis (Downloadable PDF)paper3
  28. The Peripheral Arm of Homeostatic Collapsepaper3
  29. The Temporal Architecture of Collapsepaper3
  30. Adrenergic Signalingconcept2
  31. Perineuronal Netsconcept2
  32. Perineuronal Nets, Microglial Neuroinflammation, and Alzheimer'spaper2
  33. Terminal Collapsepaper2
  34. The Crowded Cleftpaper2
  35. The Fifth Surfacepaper2
  36. The Load-Bearing Neuronpaper2
  37. The Locus Coeruleus Bridgepaper2
  38. The Senescent Frontpaper2
  39. The Unthrown Switchpaper2
  40. AD as accelerated aging of Abeta managementconcept1
  41. Aging accelerators and deceleratorsconcept1
  42. Alzheimer's disease — a process in timepaper1
  43. Clearance failure vs. overproductionconcept1
  44. Convergent Synaptic Collapseconcept1
  45. Fischer's Sideliningpaper1
  46. Inflamm-aging as disease driverconcept1
  47. The Cellular Architecture of Collapsepaper1
  48. The Complement-pruning Substratepaper1
  49. The Double Releasepaper1
  50. The Eight Stagespaper1
  51. The Pv+/gamma Axispaper1
  52. The Return Legpaper1
  53. The Speck and the Architectpaper1
  54. The Spectrum of Collapsepaper1
  55. The Unified Architecture of Collapsepaper1
CD38 Bioenergetic / mito / NAD 435 29 docs
DAB1 Reelin, synapse & ECM–PNN 424 35 docs
CAMP (LL-37) Microglia & innate immunity 414 20 docs
LRP1 Reelin, synapse & ECM–PNN 410 31 docs
ARHGEF15 (Ephexin5) Reelin, synapse & ECM–PNN 405 12 docs
BDNF Trophic / exercise / resilience 322 28 docs
ACAN (aggrecan) Reelin, synapse & ECM–PNN 307 57 docs
Matched on ACAN aggrecan
  1. The Net and the Speckpaper26
  2. The Perineuronal Turnpaper15
  3. The Matrix of Collapsepaper13
  4. The Proteolytic Turnpaper13
  5. The Staged Depositpaper13
  6. Perineuronal Nets, Microglial Neuroinflammation, and Alzheimer'spaper12
  7. The Architect's Scaffoldpaper12
  8. The Fifth Surfacepaper10
  9. The Fifty-year Prescriptionpaper10
  10. MMP-9 Inhibitors and the Phase III Therapeutic Windowpaper9
  11. One Sensor, Two Collapsespaper9
  12. The Crowded Cleftpaper9
  13. The Genetic Architecture of Neurodegenerationpaper9
  14. Fischer's Matrixpaper8
  15. The Temporal Architecture of Collapsepaper8
  16. The Unpicked Seampaper8
  17. The Coerulean Shearspaper7
  18. The First Emberpaper7
  19. The Load-Bearing Neuronpaper7
  20. Perineuronal Netsconcept6
  21. The Compressed Architecturepaper6
  22. The Eight Stagespaper6
  23. Why HMS Becomes HMS+Ppaper6
  24. Homeostatic Microglial Collapsepaper5
  25. The Homeostatic–Matrix–Synaptic (HMS) Collapse Modelpaper5
  26. The Microglial Thesis (Downloadable PDF)paper5
  27. The Unified Architecture of Collapsepaper5
  28. The Cellular Architecture of Collapsepaper4
  29. The Double Releasepaper4
  30. Alzheimer's disease — a process in timepaper3
  31. cognitive resilienceconcept3
  32. The Architect's Understudypaper3
  33. The Coerulean Clockpaper3
  34. The Coerulean Pincerpaper3
  35. The Peripheral Arm of Homeostatic Collapsepaper3
  36. The Speck and the Architectpaper3
  37. The Time to Retractpaper3
  38. The Architect's Reprievepaper2
  39. The Biomarker Cascadepaper2
  40. The Depression Continuumpaper2
  41. The Gamma Interventionpaper2
  42. The Gardener's Restraintpaper2
  43. The Unnetted Governorpaper2
  44. Adrenergic Signalingconcept1
  45. BIOENERGETIC COLLAPSE (Revised)paper1
  46. Convergent Synaptic Collapseconcept1
  47. Ecce Homopaper1
  48. Homeostatic Microglial Collapseconcept1
  49. Mapping the Vascular Dimension Onto the Genetic Dimensionpaper1
  50. The Adult-born Neuronpaper1
  51. The Contested Serinepaper1
  52. The Fading Scorepaper1
  53. The Locus Coeruleus Bridgepaper1
  54. The Mitochondrion as Nexuspaper1
  55. The Senescent Frontpaper1
  56. The Therapeutic Landscape of Collapsepaper1
  57. The Two Anchorspaper1
C4 (complement) Microglia & innate immunity 298 33 docs
SORL1 GWAS / LOAD risk 288 41 docs
PARP1 Bioenergetic / mito / NAD 262 30 docs
MTOR Autophagy / lysosome / clearance 258 49 docs
Matched on mTOR MTOR mTORC1 mTORC2
  1. How to Fix the Broken Recycling Systempaper29
  2. The Ketamine Paradoxpaper26
  3. The Therapeutic Landscape of Collapsepaper22
  4. The Clearance Collapsepaper18
  5. The Depression Continuumpaper17
  6. The Cell's Garbage System Controls Agingpaper13
  7. Testing a Popular Treatment Protocolpaper12
  8. When Myelin's Caretakers Failpaper11
  9. Many Causes, One Bottleneckpaper10
  10. How Viruses Sabotage Brain Cleanuppaper9
  11. The Same Machinepaper7
  12. BIOENERGETIC COLLAPSE (Revised)paper6
  13. One Mechanism, Many Diseases (AD, PD, ALS, HD)paper6
  14. Metabolic-Homeostatic Axisnode5
  15. When the Brain's Immune Cells Turn Toxicpaper5
  16. Comparing Different Viral Triggerspaper4
  17. The Mitochondrion as Nexuspaper4
  18. The Return Legpaper4
  19. When Poor Blood Flow Causes Dementiapaper4
  20. Can Vaccines Protect Against Dementia?paper3
  21. The Fermented Prodromepaper3
  22. Why Decline Happens Suddenly, Not Graduallypaper3
  23. Why the Cell's Recycling System Breakspaper3
  24. Bioenergeticsconcept2
  25. How 1907 Observations Predict Modern Findingspaper2
  26. The Acid Testpaper2
  27. The Biomarker Cascadepaper2
  28. The Brain's Own Antimicrobial Defensepaper2
  29. The Brake and the Bladepaper2
  30. The Fifth Surfacepaper2
  31. The Genetic Architecture of Neurodegenerationpaper2
  32. Astrocytespaper1
  33. Cellular Senescenceconcept1
  34. Homeostatic Microglial Collapsepaper1
  35. Mapping the Vascular Dimension Onto the Genetic Dimensionpaper1
  36. Iron Chelation and GPX4 Stabilizationpaper1
  37. NAD⁺ Restoration and CD38 Inhibitionpaper1
  38. Terminal Collapsepaper1
  39. The Homeostatic–Matrix–Synaptic (HMS) Collapse Modelpaper1
  40. The Losing Axonpaper1
  41. The Master Theorypaper1
  42. The Microglial Thesis (Downloadable PDF)paper1
  43. The Temporal Architecture of Collapsepaper1
  44. The Tryptophan Partitionpaper1
  45. The Unified Architecture of Collapsepaper1
  46. The Unrepaired Breachpaper1
  47. The Unthrown Switchpaper1
  48. Vaccines That May Prevent Dementiapaper1
  49. Why Damaged Mitochondria Can't Be Clearedpaper1
TARDBP (TDP-43) Neurodegeneration overlap 253 50 docs
Matched on TARDBP TDP-?43
  1. The Indifferent Neuronpaper30
  2. Why Decline Happens Suddenly, Not Graduallypaper25
  3. The Mitochondrion as Nexuspaper19
  4. Proving That Misfolded Proteins Spread Like Prionspaper17
  5. The Genetic Architecture of Neurodegenerationpaper17
  6. How to Fix the Broken Recycling Systempaper16
  7. Telling Different Dementias Apartpaper15
  8. The Uncleared Signalpaper13
  9. The Expected Eventpaper9
  10. Why All Major Neurodegenerative Diseases Are the Same Diseasepaper9
  11. The Return Legpaper8
  12. How Viruses Enter and Hide in the Brainpaper7
  13. One Mechanism, Many Diseases (AD, PD, ALS, HD)paper6
  14. Many Causes, One Bottleneckpaper4
  15. How Viruses Sabotage Brain Cleanuppaper3
  16. Mapping the Vascular Dimension Onto the Genetic Dimensionpaper3
  17. The Honest Cascadepaper3
  18. The Load-Bearing Neuronpaper3
  19. The Master Theorypaper3
  20. The Unnetted Governorpaper3
  21. The Unpicked Seampaper3
  22. Causal and Commonpaper2
  23. How the Brain's Clearance System Becomes the Disease's Highwaypaper2
  24. Phase Measurabilityconcept2
  25. The Acid Testpaper2
  26. The Bond not Madepaper2
  27. The Fifty-year Prescriptionpaper2
  28. The Trojan Neuroblastpaper2
  29. The Wax and the Weldpaper2
  30. Astrocytespaper1
  31. Different Tau Strains Cause Different Diseasespaper1
  32. Disciplinary Silos in Alzheimer's Disease Research, 1950–2020paper1
  33. Fischer's Sideliningpaper1
  34. Khachaturianpaper1
  35. Khachaturianpaper1
  36. Microglial Lipid Regulationconcept1
  37. MMP-9 Inhibitors and the Phase III Therapeutic Windowpaper1
  38. Peripheral Lipid Biomarkersconcept1
  39. Presymptomatic Lipidomic Signaturesconcept1
  40. Standard Diagnostic Biomarkers Explainedpaper1
  41. The Glial Consortium and the Timeline of Collapsepaper1
  42. The Homeostatic–Matrix–Synaptic (HMS) Collapse Modelpaper1
  43. The Losing Axonpaper1
  44. The Subtraction Errorpaper1
  45. The Tryptophan Partitionpaper1
  46. The Unthrown Switchpaper1
  47. What If We'd Listened to Fischer?paper1
  48. When Poor Blood Flow Causes Dementiapaper1
  49. Why HMS Becomes HMS+Ppaper1
  50. Why the Cell's Recycling System Breakspaper1
HSD17B10 Bioenergetic / mito / NAD 244 4 docs
Matched on HSD17B10 HSD10 ABAD 17β-HSD10 17beta-HSD10
  1. AG18051 and the Aβ–ABAD Complexpaper187
  2. The Narrow Gatepaper34
  3. TOMM40 Import Gateconcept12
  4. The Mitochondrion as Nexuspaper11
GPX4 Oxidative stress & ferroptosis 232 19 docs
CAV1 (caveolin-1) Vascular / BBB 216 12 docs
VCAM1 Vascular / BBB 197 8 docs
IDO1 Neuromodulator / circadian / kynurenine 175 10 docs
BACE1 Amyloid & Tau core 173 61 docs
Matched on BACE1
  1. The Load-Bearing Lipidpaper19
  2. The Architecture of Resistancepaper14
  3. The Janus Lipidpaper13
  4. Ramsdenpaper10
  5. The Acid Testpaper9
  6. The Return Legpaper6
  7. The Bond not Madepaper5
  8. How to Fix the Broken Recycling Systempaper4
  9. Mapping the Vascular Dimension Onto the Genetic Dimensionpaper4
  10. The Geode and the Flowerpaper4
  11. The Indifferent Neuronpaper4
  12. The Vascular Dimensionpaper4
  13. Endosomal Traffickingconcept3
  14. How Plaques Actually Formpaper3
  15. Smallpaper3
  16. The Wax and the Weldpaper3
  17. Amyloid clearance as important as depositionconcept2
  18. Blood-based biomarker panels for preclinical detectionconcept2
  19. Causal and Commonpaper2
  20. Endolysosomal Dysfunctionconcept2
  21. Epigenetic Repressionconcept2
  22. Gouraspaper2
  23. How Free Radicals Disable the Recycling Systempaper2
  24. Is the ER–Mitochondria Contact Site the Real Driver?paper2
  25. Nuclear pathology as early AD mechanismconcept2
  26. Plaques Are Tombstones, Not Killerspaper2
  27. Probabilistic multi-cause disease etiologyconcept2
  28. Selective Tau Disruptionconcept2
  29. Tau Scaffolding Interactionsconcept2
  30. The Eight Stagespaper2
  31. The Genetic Architecture of Neurodegenerationpaper2
  32. The Locus Coeruleus & the Noradrenergic Prodromepaper2
  33. The Same Machinepaper2
  34. The Staged Depositpaper2
  35. The Therapeutic Landscape of Collapsepaper2
  36. Vesicular Traffickingconcept2
  37. Aluminum as primary environmental causeconcept1
  38. Aluminum driving amyloid productionconcept1
  39. Autophagy Dysfunctionconcept1
  40. Axonal Transportconcept1
  41. Can Vaccines Protect Against Dementia?paper1
  42. Cholesterol Homeostasisconcept1
  43. Convergent Synaptic Collapse (CSC) — Grading Referencepaper1
  44. Endosomal Nexusnode1
  45. Environmental neurotoxicologyconcept1
  46. Exponential exposure-prevalence correlationconcept1
  47. Gut-brain axis in ADconcept1
  48. Innate Immunityconcept1
  49. Khachaturianpaper1
  50. Lipid Metabolismconcept1
  51. Many Causes, One Bottleneckpaper1
  52. Metabolic-neurodegenerative disease connectionconcept1
  53. Silica water as protective interventionconcept1
  54. Sphingolipid Signalingconcept1
  55. Testing a Popular Treatment Protocolpaper1
  56. The Architect's Understudypaper1
  57. The Mitochondrion as Nexuspaper1
  58. The Narrow Gatepaper1
  59. The Withdrawn Subsidypaper1
  60. TXNIP as therapeutic targetconcept1
  61. Why Damaged Mitochondria Can't Be Clearedpaper1
TNF Microglia & innate immunity 169 50 docs
Matched on TNF
  1. The Losing Axonpaper33
  2. The Therapeutic Landscape of Collapsepaper14
  3. When the Brain's Immune Cells Turn Toxicpaper10
  4. Terminal Collapsepaper8
  5. Anti-TNF-alpha therapeutic strategyconcept7
  6. TNF-alpha as central AD mediatorconcept7
  7. The Brain's Own Antimicrobial Defensepaper6
  8. The Double Releasepaper6
  9. The Spectrum of Collapsepaper6
  10. Activated microglia imaging for treatment guidanceconcept5
  11. Glial-driven neuroinflammatory disease modelconcept5
  12. How to Fix the Broken Recycling Systempaper5
  13. The Vagal Interfacepaper5
  14. How Viruses Enter and Hide in the Brainpaper3
  15. The Viral Trajectorypaper3
  16. Can Vaccines Protect Against Dementia?paper2
  17. Cellular Senescenceconcept2
  18. Endolysosomal Dysfunctionconcept2
  19. Ferroptosis and the Phase II Oligodendrocyte Crisispaper2
  20. Microglial Immunometabolismconcept2
  21. MMP-9 Inhibitors and the Phase III Therapeutic Windowpaper2
  22. Neuroinflammationconcept2
  23. NAD⁺ Restoration and CD38 Inhibitionpaper2
  24. Synaptic Competitionconcept2
  25. The Depression Continuumpaper2
  26. The Vascular Dimensionpaper2
  27. Astrocytespaper1
  28. Autophagic Collapseconcept1
  29. Disciplinary Silos in Alzheimer's Disease Research, 1950–2020paper1
  30. How Plaques Actually Formpaper1
  31. Huangpaper1
  32. Innate Immunityconcept1
  33. Lysosomal Acidificationconcept1
  34. Mapping the Vascular Dimension Onto the Genetic Dimensionpaper1
  35. Moosmann & Sohrepaper1
  36. Plaques Are Tombstones, Not Killerspaper1
  37. The Biomarker Cascadepaper1
  38. The Bond not Madepaper1
  39. The Cell's Garbage System Controls Agingpaper1
  40. The Complement-pruning Substratepaper1
  41. The DAM Trajectory and the Matrix-degrading Armpaper1
  42. The Load-Bearing Lipidpaper1
  43. The Master Theorypaper1
  44. The Mitochondrion as Nexuspaper1
  45. The Net and the Speckpaper1
  46. The Return Legpaper1
  47. The Tryptophan Partitionpaper1
  48. The Vascular Phasingpaper1
  49. Vaccines That May Prevent Dementiapaper1
  50. When Myelin's Caretakers Failpaper1
C1QA Microglia & innate immunity 167 50 docs
Matched on C1q C1QA C1QB
  1. The Complement-pruning Substratepaper18
  2. The Proteolytic Turnpaper17
  3. The Genetic Architecture of Neurodegenerationpaper10
  4. From Synapse Loss to Neuronal Death in Alzheimer's Diseasepaper8
  5. The Losing Axonpaper8
  6. MMP-9 Inhibitors and the Phase III Therapeutic Windowpaper6
  7. The Brake and the Bladepaper6
  8. The Therapeutic Landscape of Collapsepaper6
  9. Why HMS Becomes HMS+Ppaper5
  10. The Cellular Architecture of Collapsepaper4
  11. The Coerulean Clockpaper4
  12. The Load-Bearing Neuronpaper4
  13. The Temporal Architecture of Collapsepaper4
  14. The Unnetted Governorpaper4
  15. Alzheimer's disease — a process in timepaper3
  16. Homeostatic Microglial Collapsepaper3
  17. Shatz & Brottpaper3
  18. Terminal Collapsepaper3
  19. The Microglial Thesis (Downloadable PDF)paper3
  20. The Unified Architecture of Collapsepaper3
  21. The Viral Trajectorypaper3
  22. Antimicrobial hypothesis of amyloidconcept2
  23. BBB breakdown cascadeconcept2
  24. Circadian Immune Regulationconcept2
  25. Ferroptosis and the Phase II Oligodendrocyte Crisispaper2
  26. Human-germ interaction modelconcept2
  27. Neuroimmune Surveillanceconcept2
  28. Neurovascular unit as disease originconcept2
  29. SORL1 Lysosomal Functionconcept2
  30. The Compressed Architecturepaper2
  31. The INFLAMMASOME-COMPLEMENT-TREM2 Nexuspaper2
  32. The Mitochondrion as Nexuspaper2
  33. The Senescent Frontpaper2
  34. The Switch and the Sievepaper2
  35. Causal and Commonpaper1
  36. Convergent Synaptic Collapse (CSC) — Grading Referencepaper1
  37. Mapping the Vascular Dimension Onto the Genetic Dimensionpaper1
  38. Neuroimmune Interfacenode1
  39. Neuroinflammationconcept1
  40. Plaques Are Tombstones, Not Killerspaper1
  41. Synaptic Pathologyconcept1
  42. The Crowded Cleftpaper1
  43. The Double Releasepaper1
  44. The Fifth Surfacepaper1
  45. The Gamma Interventionpaper1
  46. The Gardener's Restraintpaper1
  47. The Homeostatic–Matrix–Synaptic (HMS) Collapse Modelpaper1
  48. The Load-Bearing Lipidpaper1
  49. The Matrix of Collapsepaper1
  50. The Spectrum of Collapsepaper1
RHOA Reelin, synapse & ECM–PNN 158 20 docs
NFKB1 (NF-κB) Kinase & growth-factor signalling 149 42 docs
Matched on NFKB1 NF-?κB NF-?kB NF-?kappaB
  1. The Mitochondrion as Nexuspaper27
  2. The Therapeutic Landscape of Collapsepaper19
  3. The Double Releasepaper8
  4. The Vascular Phasingpaper8
  5. Mapping the Vascular Dimension Onto the Genetic Dimensionpaper7
  6. The Coerulean Pincerpaper7
  7. The Vagal Interfacepaper7
  8. The Vascular Dimensionpaper7
  9. The Net and the Speckpaper5
  10. The Coerulean Shearspaper4
  11. How to Fix the Broken Recycling Systempaper3
  12. NAD⁺ Restoration and CD38 Inhibitionpaper3
  13. The Coerulean Interfacepaper3
  14. Acyloxyacyl Hydrolase Neuroprotectionconcept2
  15. Bacterial exudate-driven neurodegenerationconcept2
  16. Barrier dysfunction pathologyconcept2
  17. GI-tract microbiome neurotoxicityconcept2
  18. Gut Microbiome Lipid AD Axisconcept2
  19. MMP-9 Inhibitors and the Phase III Therapeutic Windowpaper2
  20. NF-kB-miRNA inflammatory cascadeconcept2
  21. One Sensor, Two Collapsespaper2
  22. The Losing Axonpaper2
  23. The Speck and the Architectpaper2
  24. The Temporal Architecture of Collapsepaper2
  25. When the Brain's Immune Cells Turn Toxicpaper2
  26. Can Vaccines Protect Against Dementia?paper1
  27. Energy metabolism declineconcept1
  28. Epigenetic and genetic interplayconcept1
  29. Ferroptosis and the Phase II Oligodendrocyte Crisispaper1
  30. Lifestyle and behavioral factorsconcept1
  31. Multifactorial etiologyconcept1
  32. PARP Inhibitors and the Locus Coeruleuspaper1
  33. Terminal Collapsepaper1
  34. The Cell's Garbage System Controls Agingpaper1
  35. The INFLAMMASOME-COMPLEMENT-TREM2 Nexuspaper1
  36. The Load-Bearing Neuronpaper1
  37. The Locus Coeruleus Bridgepaper1
  38. The Proteolytic Turnpaper1
  39. The Senescent Frontpaper1
  40. The Sensor and the Speckpaper1
  41. The Spectrum of Collapsepaper1
  42. The Unified Architecture of Collapsepaper1
TOMM40 Bioenergetic / mito / NAD 145 18 docs
GSK3B Amyloid & Tau core 144 49 docs
Matched on GSK3B GSK-?3β GSK-?3beta GSK-?3
  1. The Therapeutic Landscape of Collapsepaper18
  2. The Subtraction Errorpaper10
  3. The Trojan Neuroblastpaper10
  4. The Coerulean Pincerpaper9
  5. The Speck and the Architectpaper9
  6. Ramsdenpaper8
  7. The Bond not Madepaper8
  8. The Unthrown Switchpaper7
  9. The Matrix of Collapsepaper5
  10. Convergent Synaptic Collapse (CSC) — Grading Referencepaper3
  11. How to Fix the Broken Recycling Systempaper3
  12. The Wax and the Weldpaper3
  13. Wnt-GSK3-beta pathway integrating amyloid and tau pathologyconcept3
  14. Cytoskeletal Collapse Nodenode2
  15. Cytoskeletal Perturbationstage2
  16. Plaques Are Tombstones, Not Killerspaper2
  17. Tau Pathologyconcept2
  18. The Acid Testpaper2
  19. The Architect's Reprievepaper2
  20. The Architect's Understudypaper2
  21. The Compressed Architecturepaper2
  22. The First Emberpaper2
  23. The Licensing Tyrosinepaper2
  24. The Same Machinepaper2
  25. The Viral Trajectorypaper2
  26. Adrenergic Signalingconcept1
  27. Alzheimer's disease — a process in timepaper1
  28. Amyloid plaques as fibrotic scar tissue from BBB repairconcept1
  29. Causal and Commonpaper1
  30. Gouraspaper1
  31. Khachaturianpaper1
  32. Lipid Metabolismconcept1
  33. Microbleeds as initiating vascular event in ADconcept1
  34. Multifactorial risk accumulation modelconcept1
  35. Neurovascular injury-repair cycle driving disease progressionconcept1
  36. Perineuronal Netsconcept1
  37. Reelin-ApoE receptor axis disruptionconcept1
  38. Resilience as key to understanding AD clinical expressionconcept1
  39. Somatic mutations as novel therapeutic targetsconcept1
  40. SuperAgers demonstrate pathology-cognition dissociationconcept1
  41. The Architect's Handshakepaper1
  42. The Architect's Scaffoldpaper1
  43. The Architecture of Resistancepaper1
  44. The Energy-gated Tauopathypaper1
  45. The Homeostatic–Matrix–Synaptic (HMS) Collapse Modelpaper1
  46. The INFLAMMASOME-COMPLEMENT-TREM2 Nexuspaper1
  47. The Locus Coeruleus & the Noradrenergic Prodromepaper1
  48. The Mitochondrion as Nexuspaper1
  49. The synapse that could not switch offpaper1
TFEB Autophagy / lysosome / clearance 144 32 docs
LRRK2 Neurodegeneration overlap 138 14 docs
MAOA/MAOB Neuromodulator / circadian / kynurenine 137 12 docs
SQSTM1 (p62) Autophagy / lysosome / clearance 136 24 docs
PINK1 Bioenergetic / mito / NAD 135 25 docs
PRNP Neurodegeneration overlap 133 23 docs
PRKN Bioenergetic / mito / NAD 131 24 docs
PYCARD Microglia & innate immunity 127 15 docs
MAP1LC3B (LC3) Autophagy / lysosome / clearance 121 24 docs
GFAP Astrocyte & glial markers 117 24 docs
C3 Microglia & innate immunity 116 44 docs
Matched on C3
  1. The Therapeutic Landscape of Collapsepaper17
  2. The Complement-pruning Substratepaper12
  3. The Genetic Architecture of Neurodegenerationpaper7
  4. From Synapse Loss to Neuronal Death in Alzheimer's Diseasepaper6
  5. The Losing Axonpaper5
  6. The Spectrum of Collapsepaper5
  7. The Proteolytic Turnpaper4
  8. Terminal Collapsepaper3
  9. Why HMS Becomes HMS+Ppaper3
  10. Alzheimer's disease — a process in timepaper2
  11. Antimicrobial hypothesis of amyloidconcept2
  12. BBB breakdown cascadeconcept2
  13. Circadian Immune Regulationconcept2
  14. Ferroptosis and the Phase II Oligodendrocyte Crisispaper2
  15. Homeostatic Microglial Collapsepaper2
  16. Human-germ interaction modelconcept2
  17. MMP-9 Inhibitors and the Phase III Therapeutic Windowpaper2
  18. Neuroimmune Surveillanceconcept2
  19. Neurovascular unit as disease originconcept2
  20. Shatz & Brottpaper2
  21. SORL1 Lysosomal Functionconcept2
  22. The Cellular Architecture of Collapsepaper2
  23. The INFLAMMASOME-COMPLEMENT-TREM2 Nexuspaper2
  24. The Microglial Thesis (Downloadable PDF)paper2
  25. The Switch and the Sievepaper2
  26. The Temporal Architecture of Collapsepaper2
  27. The Unified Architecture of Collapsepaper2
  28. The Viral Trajectorypaper2
  29. Convergent Synaptic Collapse (CSC) — Grading Referencepaper1
  30. Mapping the Vascular Dimension Onto the Genetic Dimensionpaper1
  31. Neuroimmune Interfacenode1
  32. Neuroinflammationconcept1
  33. Plaques Are Tombstones, Not Killerspaper1
  34. Synaptic Pathologyconcept1
  35. The Brake and the Bladepaper1
  36. The Compressed Architecturepaper1
  37. The Fifth Surfacepaper1
  38. The Gamma Interventionpaper1
  39. The Gardener's Restraintpaper1
  40. The Honest Cascadepaper1
  41. The Mitochondrion as Nexuspaper1
  42. The Restorative Intervalpaper1
  43. The Senescent Frontpaper1
  44. The Two Anchorspaper1
GRN (progranulin) Autophagy / lysosome / clearance 115 11 docs
VLDLR Reelin, synapse & ECM–PNN 110 29 docs
FYN Amyloid & Tau core 105 19 docs
MME (neprilysin) Amyloid & Tau core 102 22 docs
AKT1 (Akt) Kinase & growth-factor signalling 93 45 docs
Matched on AKT1 Akt
  1. The Coerulean Pincerpaper10
  2. Metabolic-Homeostatic Axisnode6
  3. The Therapeutic Landscape of Collapsepaper5
  4. The Architect's Understudypaper4
  5. The Mitochondrion as Nexuspaper4
  6. The Unthrown Switchpaper4
  7. Ramsdenpaper3
  8. The Coerulean Shearspaper3
  9. The Losing Axonpaper3
  10. When Myelin's Caretakers Failpaper3
  11. When the Brain's Immune Cells Turn Toxicpaper3
  12. BIOENERGETIC COLLAPSE (Revised)paper2
  13. Bioenergeticsconcept2
  14. Can Vaccines Protect Against Dementia?paper2
  15. Comparing Different Viral Triggerspaper2
  16. How 1907 Observations Predict Modern Findingspaper2
  17. How Viruses Sabotage Brain Cleanuppaper2
  18. The Architect's Handshakepaper2
  19. The Architect's Reprievepaper2
  20. The First Emberpaper2
  21. The Indifferent Neuronpaper2
  22. The Licensing Tyrosinepaper2
  23. Endolysosomal Dysfunctionconcept1
  24. Homeostatic Microglial Collapsepaper1
  25. Huangpaper1
  26. Many Causes, One Bottleneckpaper1
  27. Mapping the Vascular Dimension Onto the Genetic Dimensionpaper1
  28. Microglial Immunometabolismconcept1
  29. Synaptic Competitionconcept1
  30. Synaptic Pathologyconcept1
  31. The Architect's Scaffoldpaper1
  32. The Biomarker Cascadepaper1
  33. The Bond not Madepaper1
  34. The Coerulean Clockpaper1
  35. The Depression Continuumpaper1
  36. The Ketamine Paradoxpaper1
  37. The Microglial Thesis (Downloadable PDF)paper1
  38. The Return Legpaper1
  39. The Speck and the Architectpaper1
  40. The synapse that could not switch offpaper1
  41. The Temporal Architecture of Collapsepaper1
  42. The Tryptophan Partitionpaper1
  43. The Unified Architecture of Collapsepaper1
  44. The Withdrawn Subsidypaper1
  45. Vaccines That May Prevent Dementiapaper1
PP2A Amyloid & Tau core 91 18 docs
CASP1 Microglia & innate immunity 90 19 docs
MMP2 Reelin, synapse & ECM–PNN 89 32 docs
TOM40 Bioenergetic / mito / NAD 88 9 docs
C9ORF72 Neurodegeneration overlap 87 9 docs
EPHB2 Reelin, synapse & ECM–PNN 86 8 docs
SNCA Neurodegeneration overlap 86 23 docs
CR3 Microglia & innate immunity 84 33 docs
BCAN (brevican) Reelin, synapse & ECM–PNN 81 27 docs
GBA Neurodegeneration overlap 81 13 docs
NGF Trophic / exercise / resilience 81 16 docs
NEFL (NfL) Reelin, synapse & ECM–PNN 80 16 docs
BIN1 GWAS / LOAD risk 76 23 docs
NTRK2 (TrkB) Trophic / exercise / resilience 76 15 docs
TNR (tenascin-R) Reelin, synapse & ECM–PNN 76 31 docs
SOD1 Oxidative stress & ferroptosis 74 19 docs
HIF1A Bioenergetic / mito / NAD 73 4 docs
CDC42 Reelin, synapse & ECM–PNN 72 7 docs
CD33 GWAS / LOAD risk 70 19 docs
HTT (huntingtin) Neurodegeneration overlap 70 14 docs
BECN1 Autophagy / lysosome / clearance 69 17 docs
P2RY12 Microglia & innate immunity 69 33 docs
SIRT1 Bioenergetic / mito / NAD 69 23 docs
AQP4 Vascular / BBB 67 6 docs
PIK3CA (PI3K) Kinase & growth-factor signalling 65 39 docs
RAB5A Autophagy / lysosome / clearance 65 11 docs
NFE2L2 (NRF2) Oxidative stress & ferroptosis 63 12 docs
AIFM2 (FSP1) Oxidative stress & ferroptosis 62 4 docs
FTH1/FTL (ferritin) Oxidative stress & ferroptosis 62 17 docs
PLCG2 GWAS / LOAD risk 62 14 docs
PRKAA (AMPK) Bioenergetic / mito / NAD 62 20 docs
CLDN5 Vascular / BBB 60 6 docs
GSDMD Microglia & innate immunity 59 9 docs
KMO Neuromodulator / circadian / kynurenine 59 6 docs
CX3CR1 Microglia & innate immunity 58 25 docs
MAPK14 (p38) Kinase & growth-factor signalling 58 8 docs
PSEN2 Amyloid & Tau core 56 29 docs
IL6 Microglia & innate immunity 55 24 docs
FNDC5 (irisin) Trophic / exercise / resilience 53 3 docs
ADAMTS4 Reelin, synapse & ECM–PNN 52 24 docs
CTSB Autophagy / lysosome / clearance 52 15 docs
TTR (transthyretin) Amyloid & Tau core 52 2 docs
Matched on TTR transthyretin
Often named withAPOECLUABI3APPC3CLDN5
  1. The Tide-gatepaper50
  2. The Honest Cascadepaper2
NRGN (neurogranin) Reelin, synapse & ECM–PNN 51 4 docs
CSF1R Microglia & innate immunity 50 17 docs
SARM1 Bioenergetic / mito / NAD 50 8 docs
ADAM10 Amyloid & Tau core 47 16 docs
DLG4 (PSD-95) Reelin, synapse & ECM–PNN 47 20 docs
SV2A Reelin, synapse & ECM–PNN 47 10 docs
TIMP3 Reelin, synapse & ECM–PNN 47 6 docs
ACAT1 Lipid, sterol & membrane 45 11 docs
TREX1 Vascular / BBB 45 2 docs
ACHE Neuromodulator / circadian / kynurenine 44 16 docs
NAMPT Bioenergetic / mito / NAD 44 8 docs
ATP synthase (ATP5x) Bioenergetic / mito / NAD 43 5 docs
CTSD Autophagy / lysosome / clearance 43 18 docs
SPI1 GWAS / LOAD risk 43 8 docs
TMEM119 Microglia & innate immunity 42 25 docs
OPTN Neurodegeneration overlap 41 9 docs
MAPT Amyloid & Tau core 40 9 docs
HTRA1 Vascular / BBB 39 1 doc
NOTCH3 Vascular / BBB 38 1 doc
ATF4 Cell death & ER stress 37 10 docs
SDC (syndecan) Reelin, synapse & ECM–PNN 37 6 docs
TYROBP GWAS / LOAD risk 37 16 docs
CDKN1A (p21) Epigenetic & senescence 36 9 docs
HDAC2 Epigenetic & senescence 36 3 docs
SNAP25 Reelin, synapse & ECM–PNN 36 6 docs
UBE3A Autophagy / lysosome / clearance 36 6 docs
ULK1 Autophagy / lysosome / clearance 36 11 docs
VPS35 Autophagy / lysosome / clearance 36 7 docs
BACE2 Amyloid & Tau core 35 4 docs
CX3CL1 (fractalkine) Microglia & innate immunity 35 13 docs
EIF2S1 (eIF2α) Cell death & ER stress 35 10 docs
MFSD2A Vascular / BBB 35 6 docs
VCAN (versican) Reelin, synapse & ECM–PNN 35 23 docs
ABCA1 GWAS / LOAD risk 34 16 docs
SIRT3 Bioenergetic / mito / NAD 34 11 docs
KL (klotho) Trophic / exercise / resilience 33 9 docs
SRC Kinase & growth-factor signalling 33 13 docs
MS4A GWAS / LOAD risk 32 9 docs
NLRP1 Microglia & innate immunity 32 3 docs
GRIA1 (GluA1) Reelin, synapse & ECM–PNN 31 15 docs
PICALM GWAS / LOAD risk 31 15 docs
PPP3CA (calcineurin) Kinase & growth-factor signalling 31 15 docs
TRPML1 Autophagy / lysosome / clearance 31 14 docs
ADAMTS5 Reelin, synapse & ECM–PNN 30 10 docs
AGER (RAGE) Vascular / BBB 30 7 docs
APPL1 Autophagy / lysosome / clearance 30 6 docs
CGAS Microglia & innate immunity 30 10 docs
SMPD1 (acid sphingomyelinase) Lipid, sterol & membrane 30 3 docs
Matched on SMPD1 acid sphingomyelinase ASMase
  1. The Load-Bearing Lipidpaper23
  2. The Janus Lipidpaper6
  3. How to Fix the Broken Recycling Systempaper1
TPH2 Neuromodulator / circadian / kynurenine 30 5 docs
SMPD3 Lipid, sterol & membrane 29 2 docs
Matched on SMPD3 neutral sphingomyelinase
  1. The Load-Bearing Lipidpaper22
  2. The Janus Lipidpaper7
ACSL4 Oxidative stress & ferroptosis 28 8 docs
ARNTL (BMAL1) Neuromodulator / circadian / kynurenine 28 10 docs
CYCS (cytochrome c) Bioenergetic / mito / NAD 28 10 docs
SALL1 Microglia & innate immunity 28 21 docs
SSH1 (slingshot-1) Reelin, synapse & ECM–PNN 28 3 docs
ABCA7 GWAS / LOAD risk 27 8 docs
GRIN2B Reelin, synapse & ECM–PNN 27 13 docs
TLR4 Microglia & innate immunity 27 16 docs
DYRK1A Amyloid & Tau core 26 2 docs
KCNC (Kv3) Neuromodulator / circadian / kynurenine 26 6 docs
MEF2C GWAS / LOAD risk 26 5 docs
ROCK2 Reelin, synapse & ECM–PNN 26 7 docs
SLC2A1 (GLUT1) Vascular / BBB 26 5 docs
ABCB1 (P-gp) Vascular / BBB 25 8 docs
CHI3L1 (YKL-40) Astrocyte & glial markers 25 5 docs
CHRNA7 Neuromodulator / circadian / kynurenine 25 9 docs
CLU GWAS / LOAD risk 25 12 docs
IL18 Microglia & innate immunity 25 13 docs
NCAN (neurocan) Reelin, synapse & ECM–PNN 25 19 docs
SNAP29 Autophagy / lysosome / clearance 25 7 docs
ABI3 GWAS / LOAD risk 24 13 docs
EIF2AK3 (PERK) Cell death & ER stress 24 12 docs
NMNAT2 Bioenergetic / mito / NAD 24 6 docs
QPRT Neuromodulator / circadian / kynurenine 24 2 docs
STING Microglia & innate immunity 24 11 docs
BCL2 (Bcl-2) Cell death & ER stress 23 11 docs
CDKN2A (p16) Epigenetic & senescence 23 3 docs
CD68 Microglia & innate immunity 22 11 docs
ATP13A2 (PARK9) Autophagy / lysosome / clearance 21 6 docs
CASP3 Cell death & ER stress 21 14 docs
CR1 GWAS / LOAD risk 21 10 docs
FUS Neurodegeneration overlap 21 7 docs
MTHFR Trophic / exercise / resilience 21 5 docs
SYK Microglia & innate immunity 21 11 docs
SYN1 (synapsin) Reelin, synapse & ECM–PNN 21 6 docs
TBK1 Microglia & innate immunity 21 4 docs
TDO2 Neuromodulator / circadian / kynurenine 21 5 docs
CD200 Microglia & innate immunity 20 5 docs
CHAT (ChAT) Neuromodulator / circadian / kynurenine 20 7 docs
DCX (doublecortin) Reelin, synapse & ECM–PNN 20 3 docs
DNM1L Bioenergetic / mito / NAD 20 12 docs
HAPLN1 Reelin, synapse & ECM–PNN 20 10 docs
IAPP Neurodegeneration overlap 20 4 docs
MMP3 Reelin, synapse & ECM–PNN 20 11 docs
TH (tyrosine hydroxylase) Neuromodulator / circadian / kynurenine 20 8 docs
CD36 Microglia & innate immunity 19 9 docs
IDE Amyloid & Tau core 19 8 docs
MAPK1/3 (ERK1/2) Kinase & growth-factor signalling 19 9 docs
MBP (myelin basic protein) Myelin & axon inhibition 19 6 docs
TOMM20 Bioenergetic / mito / NAD 19 8 docs
ATG5 Autophagy / lysosome / clearance 18 7 docs
GRIN2A Reelin, synapse & ECM–PNN 18 7 docs
NDST1 Reelin, synapse & ECM–PNN 18 8 docs
NPY Neuromodulator / circadian / kynurenine 18 9 docs
OTX2 Reelin, synapse & ECM–PNN 18 7 docs
RIPK1 Cell death & ER stress 18 4 docs
COL4A1 Vascular / BBB 17 1 doc
LIMK1 Reelin, synapse & ECM–PNN 17 6 docs
MFN2 Bioenergetic / mito / NAD 17 8 docs
PRKACA (PKA) Kinase & growth-factor signalling 17 12 docs
SLC18A2 (VMAT2) Neuromodulator / circadian / kynurenine 17 5 docs
SLC1A2 (EAAT2/GLT-1) Astrocyte & glial markers 17 6 docs
AIF1 (Iba1) Microglia & innate immunity 16 8 docs
CAT (catalase) Oxidative stress & ferroptosis 16 10 docs
DLX1 Reelin, synapse & ECM–PNN 16 7 docs
SLC40A1 (ferroportin) Oxidative stress & ferroptosis 16 5 docs
AXL Microglia & innate immunity 15 5 docs
CDK5 Amyloid & Tau core 15 10 docs
HTR1A Neuromodulator / circadian / kynurenine 15 4 docs
LAMP1 Autophagy / lysosome / clearance 15 7 docs
LDLR Lipid, sterol & membrane 15 10 docs
LPL Microglia & innate immunity 15 8 docs
P2RX7 Microglia & innate immunity 15 4 docs
PDGFRB Vascular / BBB 15 2 docs
SLC17A8 (VGLUT3) Neuromodulator / circadian / kynurenine 15 2 docs
Matched on SLC17A8 VGLUT3
  1. The Unpicked Seampaper9
  2. The Fifty-year Prescriptionpaper6
TXN Oxidative stress & ferroptosis 15 8 docs
TXNIP Microglia & innate immunity 15 9 docs
ATG7 Autophagy / lysosome / clearance 14 8 docs
CCL2 (MCP-1) Microglia & innate immunity 14 8 docs
CDK3 Epigenetic & senescence 14 6 docs
INPP5D GWAS / LOAD risk 14 5 docs
NTRK1 (TrkA) Trophic / exercise / resilience 14 9 docs
OLIG2 Down-syndrome chr21 14 3 docs
PEMT Lipid, sterol & membrane 14 1 doc
RTN4R (NgR) Myelin & axon inhibition 14 8 docs
SNAP47 Autophagy / lysosome / clearance 14 4 docs
STIM1 Cell death & ER stress 14 3 docs
Matched on STIM1
  1. Khachaturianpaper11
  2. The Uncleared Signalpaper2
  3. Khachaturianpaper1
SYP (synaptophysin) Reelin, synapse & ECM–PNN 14 11 docs
TMEM175 Autophagy / lysosome / clearance 14 5 docs
VIP Neuromodulator / circadian / kynurenine 14 5 docs
DDIT3 (CHOP) Cell death & ER stress 13 6 docs
FOXC1 Vascular / BBB 13 1 doc
HCAR2 (GPR109A) Bioenergetic / mito / NAD 13 2 docs
HS3ST2 Reelin, synapse & ECM–PNN 13 4 docs
HSPA1A (Hsp70) Cell death & ER stress 13 7 docs
MSR1 Microglia & innate immunity 13 9 docs
NMRK1 Bioenergetic / mito / NAD 13 6 docs
S100B Reelin, synapse & ECM–PNN 13 2 docs
SPP1 Microglia & innate immunity 13 8 docs
VAMP8 Autophagy / lysosome / clearance 13 7 docs
VMA21 Autophagy / lysosome / clearance 13 2 docs
CAMK2A (CaMKII) Reelin, synapse & ECM–PNN 12 6 docs
CRP Microglia & innate immunity 12 6 docs
CST7 (cystatin F) Microglia & innate immunity 12 9 docs
EP300 (p300) Epigenetic & senescence 12 5 docs
GGA3 Autophagy / lysosome / clearance 12 2 docs
IL10 Microglia & innate immunity 12 9 docs
NEK7 Microglia & innate immunity 12 5 docs
NLRP2 Microglia & innate immunity 12 2 docs
SMAD3 Kinase & growth-factor signalling 12 7 docs
TIMP1 Reelin, synapse & ECM–PNN 12 5 docs
TMEM106B Autophagy / lysosome / clearance 12 2 docs
ABCG2 (BCRP) Vascular / BBB 11 3 docs
C5AR1 Microglia & innate immunity 11 6 docs
DEGS1 Lipid, sterol & membrane 11 2 docs
Matched on DEGS1
  1. The Load-Bearing Lipidpaper8
  2. The Uncleared Signalpaper3
FOXP3 Microglia & innate immunity 11 2 docs
Matched on FOXP3
Often named withAPOEAPPCD4CLDN5CLULRP1
  1. The Peacekeeper's Paradoxpaper10
  2. The Tide-gatepaper1
HAPLN4 (Bral2) Reelin, synapse & ECM–PNN 11 8 docs
HAS1/2/3 Reelin, synapse & ECM–PNN 11 5 docs
IGF1 Trophic / exercise / resilience 11 9 docs
ITGAX Microglia & innate immunity 11 8 docs
PTGS2 (COX-2) Microglia & innate immunity 11 7 docs
SOAT1 Lipid, sterol & membrane 11 6 docs
TIMM23 Bioenergetic / mito / NAD 11 3 docs
BNIP3L (NIX) Bioenergetic / mito / NAD 10 3 docs
CD2AP GWAS / LOAD risk 10 5 docs
CD4 Microglia & innate immunity 10 3 docs
GLP1R Neuromodulator / circadian / kynurenine 10 5 docs
HEXB Autophagy / lysosome / clearance 10 9 docs
LEP (leptin) Neuromodulator / circadian / kynurenine 10 2 docs
RAB7A Autophagy / lysosome / clearance 10 5 docs
RELCH Autophagy / lysosome / clearance 10 5 docs
RORB Reelin, synapse & ECM–PNN 10 2 docs
SMAD7 Kinase & growth-factor signalling 10 6 docs
VCP Neurodegeneration overlap 10 5 docs
VDAC1 Bioenergetic / mito / NAD 10 3 docs
VDR Neuromodulator / circadian / kynurenine 10 3 docs
ADAMTS1 Reelin, synapse & ECM–PNN 9 4 docs
BAX Cell death & ER stress 9 4 docs
CD22 Microglia & innate immunity 9 1 doc
CLEC7A (dectin-1) Microglia & innate immunity 9 6 docs
DNM2 Autophagy / lysosome / clearance 9 8 docs
GAD1 (GAD67) Reelin, synapse & ECM–PNN 9 3 docs
HTR2A Neuromodulator / circadian / kynurenine 9 4 docs
IL1B Microglia & innate immunity 9 5 docs
MRC1 (CD206) Microglia & innate immunity 9 6 docs
NOS2 (iNOS) Microglia & innate immunity 9 4 docs
PPARGC1A Bioenergetic / mito / NAD 9 1 doc
Matched on PPARGC1A PGC-?1α PGC-?1alpha PGC-?1a
  1. The Mitochondrion as Nexuspaper9
PPIF (cyclophilin D) Bioenergetic / mito / NAD 9 4 docs
PRKCA (PKC) Kinase & growth-factor signalling 9 6 docs
SLC7A11 (xCT) Oxidative stress & ferroptosis 9 5 docs
SOD2 Oxidative stress & ferroptosis 9 4 docs
STAT (1/3/6) Microglia & innate immunity 9 5 docs
VPS26 Autophagy / lysosome / clearance 9 5 docs
ALOX15 Oxidative stress & ferroptosis 8 5 docs
ASAH1 (acid ceramidase) Lipid, sterol & membrane 8 1 doc
Matched on ASAH1 acid ceramidase
  1. The Load-Bearing Lipidpaper8
CD74 Microglia & innate immunity 8 3 docs
CTNNB1 (β-catenin) Kinase & growth-factor signalling 8 5 docs
HAMP (hepcidin) Oxidative stress & ferroptosis 8 1 doc
HMOX1 Oxidative stress & ferroptosis 8 3 docs
INSR Neuromodulator / circadian / kynurenine 8 6 docs
MLKL Cell death & ER stress 8 2 docs
Matched on MLKL
Often named withADAMTS4APPBDNFC1QAC3GPX4
  1. Terminal Collapsepaper7
  2. The Spectrum of Collapsepaper1
OPA1 Bioenergetic / mito / NAD 8 4 docs
PDHA1 (PDH) Bioenergetic / mito / NAD 8 5 docs
PLG (plasminogen) Vascular / BBB 8 4 docs
PPP1CA (PP1) Kinase & growth-factor signalling 8 8 docs
SATB1 Epigenetic & senescence 8 3 docs
SLC7A5 (LAT1) Vascular / BBB 8 4 docs
SMAD2 Kinase & growth-factor signalling 8 6 docs
TFAM Bioenergetic / mito / NAD 8 4 docs
TFE3 Autophagy / lysosome / clearance 8 5 docs
TP53 (p53) Epigenetic & senescence 8 6 docs
VEGF Trophic / exercise / resilience 8 6 docs
ACSL1 Lipid, sterol & membrane 7 5 docs
ADAMTS2 Reelin, synapse & ECM–PNN 7 6 docs
CD47 Microglia & innate immunity 7 2 docs
Matched on CD47
  1. The Double Releasepaper6
  2. The Brake and the Bladepaper1
CHL1 Reelin, synapse & ECM–PNN 7 5 docs
DBH Neuromodulator / circadian / kynurenine 7 3 docs
FANCC Epigenetic & senescence 7 2 docs
FLVCR2 Vascular / BBB 7 1 doc
Matched on FLVCR2
  1. The Wrong Half of the Moleculepaper7
HEXIM1 Epigenetic & senescence 7 7 docs
HSF1 Cell death & ER stress 7 2 docs
ICAM1 Vascular / BBB 7 4 docs
IDO2 Neuromodulator / circadian / kynurenine 7 4 docs
LILRB5 GWAS / LOAD risk 7 2 docs
MAP2 Reelin, synapse & ECM–PNN 7 5 docs
MAPK8 (JNK) Kinase & growth-factor signalling 7 4 docs
NQO2 Oxidative stress & ferroptosis 7 3 docs
NRG1 (neuregulin-1) Reelin, synapse & ECM–PNN 7 5 docs
OGDH (KGDH) Bioenergetic / mito / NAD 7 2 docs
Matched on OGDH KGDH ketoglutarate dehydrogenase
  1. The Therapeutic Landscape of Collapsepaper5
  2. The Scheduled Withdrawalpaper2
RIPK3 Cell death & ER stress 7 2 docs
Matched on RIPK3
Often named withADAMTS4APPBDNFC1QAC3GPX4
  1. Terminal Collapsepaper6
  2. The Spectrum of Collapsepaper1
SIRPA Microglia & innate immunity 7 2 docs
Matched on SIRPA SIRP
  1. The Double Releasepaper5
  2. The Brake and the Bladepaper2
SIRT6 Bioenergetic / mito / NAD 7 4 docs
SIRT7 Bioenergetic / mito / NAD 7 4 docs
TFRC Oxidative stress & ferroptosis 7 4 docs
TLR2 Microglia & innate immunity 7 4 docs
VPS29 Autophagy / lysosome / clearance 7 4 docs
VPS41 Autophagy / lysosome / clearance 7 2 docs
ACOX1 Lipid, sterol & membrane 6 3 docs
ADRB (β-AR) Neuromodulator / circadian / kynurenine 6 1 doc
Matched on ADRB1 ADRB2 β[12]?-AR β-adrenergic
  1. The Double Releasepaper6
AOAH Microglia & innate immunity 6 6 docs
APAF1 Cell death & ER stress 6 6 docs
ATP2A2 (SERCA2) Cell death & ER stress 6 3 docs
CD14 Microglia & innate immunity 6 4 docs
CD163 Microglia & innate immunity 6 6 docs
CHST3 Reelin, synapse & ECM–PNN 6 3 docs
EPHA1 GWAS / LOAD risk 6 3 docs
FASN Lipid, sterol & membrane 6 3 docs
FGA/FGB/FGG (fibrinogen) Vascular / BBB 6 3 docs
GRAMD1B (Aster-B) Lipid, sterol & membrane 6 2 docs
Matched on GRAMD1B Aster-?B
  1. The Unthrown Switchpaper4
  2. The Crowded Cleftpaper2
HDAC6 Epigenetic & senescence 6 3 docs
LPCAT3 Lipid, sterol & membrane 6 3 docs
MFN1 Bioenergetic / mito / NAD 6 4 docs
NGFR (p75NTR) Trophic / exercise / resilience 6 3 docs
Matched on NGFR p75-?NTR p75 neurotrophin receptor
  1. How Viruses Enter and Hide in the Brainpaper4
  2. The Janus Lipidpaper1
  3. The Withdrawn Subsidypaper1
NOS3 (eNOS) Vascular / BBB 6 1 doc
PLEKHM1 Autophagy / lysosome / clearance 6 3 docs
PLP1 Myelin & axon inhibition 6 3 docs
RAB11A Autophagy / lysosome / clearance 6 4 docs
RAC1 Reelin, synapse & ECM–PNN 6 4 docs
ROCK1 Reelin, synapse & ECM–PNN 6 4 docs
SLC5A7 (CHT1) Neuromodulator / circadian / kynurenine 6 1 doc
Matched on SLC5A7 CHT1
  1. The Wrong Half of the Moleculepaper6
STX17 (syntaxin-17) Autophagy / lysosome / clearance 6 3 docs
TGFB1 Kinase & growth-factor signalling 6 6 docs
VAPB Neurodegeneration overlap 6 2 docs
Matched on VAPB
Often named withAPOEAPPBACE1BAXGSK3BMFN2
  1. The Wax and the Weldpaper5
  2. The Mitochondrion as Nexuspaper1
VPS4A Autophagy / lysosome / clearance 6 5 docs
ZBP1 Microglia & innate immunity 6 1 doc
Matched on ZBP1
  1. The Single Cutpaper6
AANAT Neuromodulator / circadian / kynurenine 5 3 docs
ALOX5 Oxidative stress & ferroptosis 5 4 docs
CHST11 Reelin, synapse & ECM–PNN 5 3 docs
CRH Neuromodulator / circadian / kynurenine 5 2 docs
Matched on CRH corticotropin[- ]releasing hormone
  1. The Unthrown Switchpaper4
  2. The Depression Continuumpaper1
DGAT2 Lipid, sterol & membrane 5 4 docs
EPG5 Autophagy / lysosome / clearance 5 2 docs
GAD2 (GAD65) Reelin, synapse & ECM–PNN 5 2 docs
GAS6 Microglia & innate immunity 5 3 docs
GCLC Oxidative stress & ferroptosis 5 3 docs
GPHN (gephyrin) Reelin, synapse & ECM–PNN 5 2 docs
HSP90AA1 (Hsp90) Cell death & ER stress 5 3 docs
IFNAR1/2 Down-syndrome chr21 5 2 docs
Matched on IFNAR1 IFNAR2 IFNAR
Often named withAPOEAPPC1QAC3CR3GSK3B
  1. The Compressed Architecturepaper4
  2. The Viral Trajectorypaper1
ITM2B (BRI2) Amyloid & Tau core 5 2 docs
ITPR1 (IP3R) Cell death & ER stress 5 2 docs
Matched on ITPR1 IP3 ?receptor IP3R
  1. The Mitochondrion as Nexuspaper4
  2. Khachaturianpaper1
JAK2 Microglia & innate immunity 5 1 doc
KEAP1 Oxidative stress & ferroptosis 5 2 docs
LMNB1 Epigenetic & senescence 5 4 docs
MOG Myelin & axon inhibition 5 2 docs
NMRK2 Bioenergetic / mito / NAD 5 4 docs
NPTX2 Reelin, synapse & ECM–PNN 5 3 docs
PARL Bioenergetic / mito / NAD 5 3 docs
PLD3 GWAS / LOAD risk 5 3 docs
POLG Bioenergetic / mito / NAD 5 2 docs
SYNJ1 Down-syndrome chr21 5 1 doc
TSPO Microglia & innate immunity 5 3 docs
WDR91 Autophagy / lysosome / clearance 5 2 docs
APBB1 Amyloid & Tau core 4 1 doc
Matched on APBB1 Fe65
  1. The Losing Axonpaper4
APLP1 Amyloid & Tau core 4 2 docs
Matched on APLP1
  1. Causal and Commonpaper2
  2. Smallpaper2
APOC1 GWAS / LOAD risk 4 2 docs
CASP8 Cell death & ER stress 4 2 docs
Matched on CASP8 caspase-?8
Often named withAPPBIN1C1QAC3CASP1CASP9
  1. Terminal Collapsepaper3
  2. The Mitochondrion as Nexuspaper1
CCR5 Microglia & innate immunity 4 2 docs
CSNK1D (CK1δ) Kinase & growth-factor signalling 4 2 docs
Matched on CSNK1D CK1 casein kinase 1
  1. The Bond not Madepaper3
  2. The Return Legpaper1
ERBB4 Reelin, synapse & ECM–PNN 4 2 docs
FKBP5 Neuromodulator / circadian / kynurenine 4 2 docs
GAP43 Reelin, synapse & ECM–PNN 4 1 doc
GPX1 Oxidative stress & ferroptosis 4 3 docs
H2AX Epigenetic & senescence 4 2 docs
HK1 Bioenergetic / mito / NAD 4 4 docs
JAK1 Microglia & innate immunity 4 3 docs
LHX6 Reelin, synapse & ECM–PNN 4 2 docs
LPCAT4 Lipid, sterol & membrane 4 2 docs
Matched on LPCAT4
  1. The Uncleared Signalpaper3
  2. The Return Legpaper1
MCU Bioenergetic / mito / NAD 4 2 docs
Matched on MCU mitochondrial calcium uniporter
  1. The Mitochondrion as Nexuspaper2
  2. Why the Cell's Recycling System Breakspaper2
NAPRT Bioenergetic / mito / NAD 4 4 docs
PLIN2 (perilipin-2) Lipid, sterol & membrane 4 4 docs
PROS1 Microglia & innate immunity 4 2 docs
PTEN Kinase & growth-factor signalling 4 4 docs
RECK Reelin, synapse & ECM–PNN 4 2 docs
RILPL1 Autophagy / lysosome / clearance 4 2 docs
SHH Kinase & growth-factor signalling 4 3 docs
SLC6A3 (DAT) Neuromodulator / circadian / kynurenine 4 1 doc
SUMF1 Autophagy / lysosome / clearance 4 2 docs
TAX1BP1 Autophagy / lysosome / clearance 4 4 docs
TBC1D24 Neurodegeneration overlap 4 2 docs
TET1/2/3 Epigenetic & senescence 4 1 doc
Matched on TET1 TET2 TET3
  1. The Architecture of Resistancepaper4
TGFBR1 Kinase & growth-factor signalling 4 3 docs
TIMP2 Reelin, synapse & ECM–PNN 4 3 docs
TLR6 Microglia & innate immunity 4 2 docs
TRIM44 Autophagy / lysosome / clearance 4 2 docs
ACE2 Vascular / BBB 3 2 docs
APLP2 Amyloid & Tau core 3 1 doc
Matched on APLP2
  1. The Losing Axonpaper3
ATAD1 (Thorase) Bioenergetic / mito / NAD 3 2 docs
Matched on ATAD1 Thorase
  1. The Narrow Gatepaper2
  2. TOMM40 Import Gateconcept1
ATF3 Cell death & ER stress 3 3 docs
ATP8B4 GWAS / LOAD risk 3 2 docs
Matched on ATP8B4
  1. The Uncleared Signalpaper2
  2. The Return Legpaper1
AVP (vasopressin) Neuromodulator / circadian / kynurenine 3 1 doc
Matched on AVP vasopressin
  1. The Pineal Interfacepaper3
B2M Microglia & innate immunity 3 2 docs
CANX (calnexin) Cell death & ER stress 3 3 docs
CD44 Microglia & innate immunity 3 2 docs
CHAC1 Oxidative stress & ferroptosis 3 3 docs
CTSS (cathepsin S) Autophagy / lysosome / clearance 3 1 doc
Matched on CTSS cathepsin S
  1. The Net and the Speckpaper3
CXCL1 Microglia & innate immunity 3 3 docs
CXCR4 Microglia & innate immunity 3 2 docs
EXT1 Reelin, synapse & ECM–PNN 3 2 docs
FUNDC1 Bioenergetic / mito / NAD 3 3 docs
GLUL (glutamine synthetase) Astrocyte & glial markers 3 3 docs
HLA-DRB1 GWAS / LOAD risk 3 2 docs
Matched on HLA-DRB1 HLA-DRB5 HLA-DR
  1. The Fifth Surfacepaper2
  2. The Gardener's Restraintpaper1
HMGB1 Microglia & innate immunity 3 3 docs
HSPA5 (BiP/GRP78) Cell death & ER stress 3 1 doc
Matched on HSPA5 BiP GRP78
Often named withACE2AXLCCR5CD4CXCR4HTR2A
  1. How Viruses Enter and Hide in the Brainpaper3
ITGAM Microglia & innate immunity 3 2 docs
MAG Myelin & axon inhibition 3 2 docs
Matched on myelin[- ]associated glycoprotein
  1. The Load-Bearing Lipidpaper2
  2. The Genetic Architecture of Neurodegenerationpaper1
MIF Microglia & innate immunity 3 3 docs
Matched on MIF macrophage migration inhibitory factor
Often named withCD74
  1. Adult hippocampal neurogenesis restorationconcept1
  2. CD74 Microglial Signalingconcept1
  3. Sensory Loss Dementia Correlationconcept1
MTNR1A/B Neuromodulator / circadian / kynurenine 3 1 doc
Matched on MTNR1A MTNR1B melatonin receptor
  1. The Pineal Interfacepaper3
NOD2 Microglia & innate immunity 3 3 docs
NPC1 Autophagy / lysosome / clearance 3 2 docs
NRF1 (nuclear respiratory factor 1) Bioenergetic / mito / NAD 3 2 docs
OMA1 Bioenergetic / mito / NAD 3 2 docs
OXR1 Oxidative stress & ferroptosis 3 2 docs
P2RY13 Microglia & innate immunity 3 2 docs
PPP2R2A (B55α) Kinase & growth-factor signalling 3 3 docs
PPP5C (PP5) Kinase & growth-factor signalling 3 3 docs
Matched on PPP5C PP5
  1. The First Emberpaper1
  2. The Silenced Eraserpaper1
  3. The Single Cutpaper1
RCAN1 Down-syndrome chr21 3 1 doc
SLC11A2 (DMT1) Oxidative stress & ferroptosis 3 2 docs
SMCR8 Autophagy / lysosome / clearance 3 2 docs
SOX2 Epigenetic & senescence 3 2 docs
SREBF2 (SREBP-2) Lipid, sterol & membrane 3 2 docs
Matched on SREBF2 SREBP-?2
  1. The Unthrown Switchpaper2
  2. The Losing Axonpaper1
TPH1 Neuromodulator / circadian / kynurenine 3 3 docs
WDR41 Autophagy / lysosome / clearance 3 3 docs
ADRA2A Neuromodulator / circadian / kynurenine 2 2 docs
AIM2 Microglia & innate immunity 2 2 docs
ATF6 Cell death & ER stress 2 2 docs
ATG16L1 Autophagy / lysosome / clearance 2 2 docs
ATG9A Autophagy / lysosome / clearance 2 2 docs
BCL2L1 (Bcl-xL) Cell death & ER stress 2 2 docs
BHMT Trophic / exercise / resilience 2 1 doc
CASP9 Cell death & ER stress 2 2 docs
Matched on CASP9 caspase-?9
Often named withAPPBIN1C1QAC3CASP1CASP8
  1. Terminal Collapsepaper1
  2. The Mitochondrion as Nexuspaper1
CCR2 Microglia & innate immunity 2 2 docs
CDKN2D (p19INK4d) Epigenetic & senescence 2 1 doc
CST3 (cystatin C) Amyloid & Tau core 2 2 docs
Matched on CST3 cystatin C
  1. The Brain's Own Antimicrobial Defensepaper1
  2. The Single Cutpaper1
CTSL (cathepsin L) Autophagy / lysosome / clearance 2 2 docs
CYP46A1 Lipid, sterol & membrane 2 2 docs
Matched on CYP46A1 24S-?hydroxylase
  1. Cholesterol Homeostasisconcept1
  2. The Mitochondrion as Nexuspaper1
FOXO3 Trophic / exercise / resilience 2 2 docs
GCLM Oxidative stress & ferroptosis 2 1 doc
GHRL (ghrelin) Neuromodulator / circadian / kynurenine 2 1 doc
HMGCR Lipid, sterol & membrane 2 2 docs
Matched on HMGCR HMG-?CoA reductase
  1. The Load-Bearing Lipidpaper1
  2. The Therapeutic Landscape of Collapsepaper1
IFITM3 Microglia & innate immunity 2 1 doc
KYNU Neuromodulator / circadian / kynurenine 2 1 doc
LAMP2 Autophagy / lysosome / clearance 2 2 docs
LRP2 (megalin) Vascular / BBB 2 1 doc
Matched on LRP2 megalin
  1. The Tide-gatepaper2
NR1H3 (LXRα) Lipid, sterol & membrane 2 2 docs
OMG (OMgp) Myelin & axon inhibition 2 1 doc
Matched on OMgp
  1. The Brake and the Bladepaper2
RIN3 GWAS / LOAD risk 2 2 docs
Matched on RIN3
  1. Endosomal Traffickingconcept1
  2. The Acid Testpaper1
RTN4 (Nogo-A) Myelin & axon inhibition 2 1 doc
Matched on RTN4 Nogo-?A Nogo(?! ?receptor)
  1. The Brake and the Bladepaper2
SMAD4 Kinase & growth-factor signalling 2 2 docs
WWTR1 (TAZ) Kinase & growth-factor signalling 2 1 doc
Matched on WWTR1 TAZ
  1. The Single Cutpaper2
YAP1 Kinase & growth-factor signalling 2 1 doc
Matched on YAP1 YAP
  1. The Single Cutpaper2
ATG13 Autophagy / lysosome / clearance 1 1 doc
Matched on ATG13
  1. When Myelin's Caretakers Failpaper1
C3AR1 Microglia & innate immunity 1 1 doc
CAST (calpastatin) Reelin, synapse & ECM–PNN 1 1 doc
Matched on calpastatin
  1. The Acid Testpaper1
EGFR Kinase & growth-factor signalling 1 1 doc
ERN1 (IRE1) Cell death & ER stress 1 1 doc
Matched on ERN1 IRE1
  1. When Myelin's Caretakers Failpaper1
LCMT1 Kinase & growth-factor signalling 1 1 doc
Matched on LCMT1
  1. The Single Cutpaper1
MTR (methionine synthase) Trophic / exercise / resilience 1 1 doc
Matched on methionine synthase
  1. The Wrong Half of the Moleculepaper1
NMNAT1 Bioenergetic / mito / NAD 1 1 doc
NQO1 Oxidative stress & ferroptosis 1 1 doc
NR3C1 (GR) Epigenetic & senescence 1 1 doc
Matched on NR3C1 glucocorticoid receptor
  1. How to Fix the Broken Recycling Systempaper1
PCSK9 Lipid, sterol & membrane 1 1 doc
PLA2G4A (cPLA2) Microglia & innate immunity 1 1 doc
Matched on PLA2G4A cPLA2
  1. The Load-Bearing Lipidpaper1
RB1CC1 (FIP200) Autophagy / lysosome / clearance 1 1 doc
Matched on RB1CC1 FIP200
  1. When Myelin's Caretakers Failpaper1
SERPINA3 Amyloid & Tau core 1 1 doc
Matched on SERPINA3 antichymotrypsin
Often named withABI3APOEAPPC3CLUDLX1
  1. The Honest Cascadepaper1
SERPINE1 (PAI-1) Vascular / BBB 1 1 doc
Matched on SERPINE1 PAI-?1
  1. The Unthrown Switchpaper1
SHANK3 Reelin, synapse & ECM–PNN 1 1 doc
SIRT2 Bioenergetic / mito / NAD 1 1 doc
SLC6A2 (NET) Neuromodulator / circadian / kynurenine 1 1 doc
Matched on SLC6A2 norepinephrine transporter
  1. The Coerulean Pincerpaper1
SPOCK3 (testican-3) Reelin, synapse & ECM–PNN 1 1 doc
Matched on SPOCK3 testican-?3
Often named withABI3APOEAPPC3CLUDLX1
  1. The Honest Cascadepaper1
SSH2 Reelin, synapse & ECM–PNN 1 1 doc
TLR9 Microglia & innate immunity 1 1 doc

Method

Counts come from a case-insensitive, word-bounded text scan of each published page — the 120 papers rendered in full plus the concept, node and stage pages. The 53 PDF-only papers carry no text on the site and are not scanned. Each gene matches its symbol and its curated aliases (RELN also counts reelin; APOE counts ApoE4 and apolipoprotein E). A sentence naming two spellings counts twice. The entrant and external-scientist dossiers are withheld from this edition and are not scanned, so these tallies run lower than the full corpus.

Important noticeThis is a research platform, not a medical site. Nothing here is medical advice, a diagnosis, or a treatment recommendation, and none of it has been reviewed by a regulator. The drugs, doses and trials discussed are research literature, not prescriptions. If dementia affects you or someone you care about, speak to a doctor.

Compiled from the knowledge base and the research corpus under the Organic Network Synthesis methodology · the research corpus of Adult Cognitive Disease · the seven monographs are here. 2026.

827 interlinked articles · 120 papers in full · 53 as typeset PDFs · 635 concepts · 7 convergence nodes · 5 temporal stages.

Discussion

Corrections and disagreements are welcome here, and citation corrections most of all. Posting needs a GitHub account. Please read Taking Part first — in particular, nothing here is medical advice.